| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0053 |
|---|
| Symbol | |
|---|
| ID | 8135352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 64464 |
|---|
| End bp | 66569 |
|---|
| Gene Length | 2106 bp |
|---|
| Protein Length | 701 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644867670 |
|---|
| Product | protein of unknown function DUF323 |
|---|
| Protein accession | YP_003019898 |
|---|
| Protein GI | 253698709 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.000000000456443 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGA GAAAAACACA TTCGGTAATA CTGACAGAAG GGGACCCCGA ACAGAAAAGG
GCCGAGATAC TTCACTACTT TCATGCCACC TTCACCATCG ACGAGCGCCT CTATGAGACC
CTCAAGGACG AAACGTCCTT TTACCTTAAG GGGGACCGGC TCCGGCATCC GCTCGTCTTC
TACTTCGGCC ATACGGCCGC CTTCTTCGTC AACAAGCTCA TCATCGCCCG GGTCATAGAC
CGGCGCGTGA ATCCCCGTTT CGAATCGCTC TTCGCCGTAG GCGTCGACGA GATGTCCTGG
GACGACCTGA ACGATTCGCA CTACGACTGG CCCACCCCCG GCGAGGTGAA GCGTTTCCGG
GACCAGGTGC GCGACCTGGT GGACGGCCTG ATCAAGACGC TGCCGCTTAC CCTTCCCATC
ACCTGGGAGC ACCCCTTCTG GGCAATCATG ATGGGGATCG AGCACGAACG GATCCACCTG
GAGACCTCGT CCGTGCTGAT CCGCCAGCTT CCCCTGGACC GGGTGCGGCG CCACGACTTC
TGGGAGATCT GCCGGGAATC CGGCGAGCCC GCGGCGAACG AACTGCTGCC GGTTTCCGCC
GGCACGGTGA GGCTCGGGAA AGAGGAGGGG CATCCCCTCT ACGGTTGGGA CAACGAGTAC
GGAAGGCGCG AGGCGAGGGT TGAGGCGTTC TCCGCCTCGA AGTTCCTGGT CTCGAACCGC
GAGTACCTGG CCTTCGTGGA GGCTGGGGGG TACCTGGAGC GGGGGTGGTG GACGGAGGAG
GGGTGGAGCT GGCGCAGCTT CAAGGAGGCG GAGCATCCTC TTTTCTGGGT GGAACGCGAA
GGGGGGTGGG GGCTCAGAAC CATGCTGGAG GTCGTCGACC TTCCGTGGGA CTGGCCGGTC
GAGGTGAATT ACCTGGAGGC GAAGGCGTTC TGCAACTGGC TCTCCGCTAA AAGCGGCAAA
TCGATCAGGC TCCCGACGGA GGATGAGTGG TACCGCCTGT GCGAGCTGGC GGGGGTGCCG
GACCAGCCCG GGTGGAACCG GGCGCCGGGG AACATAAACC TCGAATACTG GGCTTCCTCC
TGCCCGGTGG ACCGCTTCGC CTTCGGCGAT TTCTTCGACC TGGTCGGGAA CGTTTGGCAG
TGGACGGAGA CCCCCATCTA TCCCTTCCAC GGCTTCCGGA TTCACCCCTG GTACGACGAT
TTCTCGACCC CCACCTTCGA CACGCGGCAC AACCTGATCA AGGGGGGCTC CTGGATCTCC
ACCGGCAACG AGGCGACCCG CGATTCACGC TACGCCTTCA GGAGGCATTT CTTCCAGCAC
GCCGGTTTTC GCTACGTCGA AAGCGCGCAC CCTGTCGAGA TCCACGAGGA CCCGTACGAG
ACGGACGCGC TTGCCGCGCA GTACTGCGAC GCCCACTACG GCCCCGAGCA TTTCGGGGTC
CCCAACTTCC CCAGGGCCTG CGCGGAGATC TGCCTGGAGC TGACCCGCGG GAGCTCCCGG
GGGCATGCAC TCGACCTGGG GTGCGCCGTC GGGCGCGCGA GCTTCGAGCT GGCGCGCGGC
TTCGACCAGG TGACGGGGCT CGATTTTTCG AGCCGCTTCT TCCGCCTGGC CGCGAGGATG
CAGGAGGAGG GGGGTCTGCG CTATGCCCTG CCGGAGGAGG GGGAGGTGGT TTCCTACCAC
GAGCTGGAGC TTGAGGATCT GGGGCTCAAG GAGGTCAGGG AGCGGGTGCA ATTCTTCCAG
GCGGACGCCT GCAACCTCCC CGACAAGTTC ACCGGCTACG ACCTGGTGCT GGCCGCGAAC
CTGATCGACC GGCTCTATTC GCCCCGCCGC TTCCTGAAGG CGATACGCGA AAGGCTAAAC
TCCGGCGGGC TCCTGGTGAT CGCGTCCCCC TACACCTGGC TTGAGGAATA CACGAAAAAG
GAAGAATGGC TGGGAGGTTA CCGGGAAGCG GGAGAACCGG TGTGGACTAT CGATGGACTA
TCGCGGGAAC TTTTGCCATA CTTCACGCCG CTCGGTGCTC CGCGCGAGAT CCCGTTCGTG
ATCAGGGAGA CGCGCCGCAA GTTCCAGTAC AGCATCGCGC AATTGACGGT ATGGGAGCTT
AAATGA
|
|---|
| Protein sequence | MDLRKTHSVI LTEGDPEQKR AEILHYFHAT FTIDERLYET LKDETSFYLK GDRLRHPLVF
YFGHTAAFFV NKLIIARVID RRVNPRFESL FAVGVDEMSW DDLNDSHYDW PTPGEVKRFR
DQVRDLVDGL IKTLPLTLPI TWEHPFWAIM MGIEHERIHL ETSSVLIRQL PLDRVRRHDF
WEICRESGEP AANELLPVSA GTVRLGKEEG HPLYGWDNEY GRREARVEAF SASKFLVSNR
EYLAFVEAGG YLERGWWTEE GWSWRSFKEA EHPLFWVERE GGWGLRTMLE VVDLPWDWPV
EVNYLEAKAF CNWLSAKSGK SIRLPTEDEW YRLCELAGVP DQPGWNRAPG NINLEYWASS
CPVDRFAFGD FFDLVGNVWQ WTETPIYPFH GFRIHPWYDD FSTPTFDTRH NLIKGGSWIS
TGNEATRDSR YAFRRHFFQH AGFRYVESAH PVEIHEDPYE TDALAAQYCD AHYGPEHFGV
PNFPRACAEI CLELTRGSSR GHALDLGCAV GRASFELARG FDQVTGLDFS SRFFRLAARM
QEEGGLRYAL PEEGEVVSYH ELELEDLGLK EVRERVQFFQ ADACNLPDKF TGYDLVLAAN
LIDRLYSPRR FLKAIRERLN SGGLLVIASP YTWLEEYTKK EEWLGGYREA GEPVWTIDGL
SRELLPYFTP LGAPREIPFV IRETRRKFQY SIAQLTVWEL K
|
|---|
| |