Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0033 |
Symbol | |
ID | 8135332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 42772 |
End bp | 44580 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644867650 |
Product | ABC transporter related |
Protein accession | YP_003019878 |
Protein GI | 253698689 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTTCG GCGGGATCTA CGAGGACGAG ATAGTCGGCA AGATGTACGA CCGGCGGCTG ATGGGGCGCT TCTTCCCCTA TCTGCTGCCG TATCGCCGCC TCATCGCGGC CGCGCTCATA CTCCTCCCTT TCGTGGCGGC GGCCAAACTG GTGCAGCCCT GGATCCTCAA ACTGGCGATC GACGACCACA TAACCAAGGG GGTCATGGCG GGATTGCCGT CATTGGCGGC GCTTTTCCTG GGGGTCATCC TCGCCGAGTC GCTCCTCATG TTCGCGCAGG TTTACCTCTT GCAGTACGTG GGGCAGAAGG TGATGTACGA CATCCGGGTG GCGCTCTTCT CGCACCTCCA GCGCCTCTCG GCCCGCTTCT TCGACCGGAC CCCGGTCGGG AGCCTCGTCT CCAGGCTCAC CAGCGACATC GAGGTGCTGG GGGAGATGTT CGCCGCCGGG ATCGTCACCG TGGTGGGGGA TGTCCTGGTC CTGGCGGGGA TCGTCGCCAT CATGCTCTTC ATGAACGTGA AGCTGTCGCT GGTAACCTTC TCGGTGCTCC CTTTCCTGGT CTGGGCTGCC TTCTCCTTCA GGAAGTGGAT GCGCGCGGCC TTCAGGCAGG TGCGGGCCAG GCAGAGTAAC TTAAGCGCCT TTCTGACCGA GAGCATCGGC GGCATGGCGG TGGTGCAACT CTTCAACCGG GAGAAGGACG AGGCGCGCGA ATTCCGCAGG CTGAACACGG CGTACATGGA ATCGAACCTC CCGGTCATCA CCTGGGACGC CGCGCTTTTC GCGGTGGTGG AGACGCTCTC CTCGGTGGCC GTGGCGCTCA TCATCTGGTA CGGCGGAGGG GAGATCGTCA GGGGGACCCT TTCCTTCGGC GCGCTGGTCG CCTTCATCCA GTACATCGAG CGCTTCTTCT CCCCGATCCG CGATCTTTCC GCCAAATACT CGGTGATGCA AGGGGCGATG GCCTCCCTGG AGCGGATCTT CACGCTTCTG GACAACCAGG CGCTGGAGCC CGCCCTGCTC AACGAAAGGA GCTCCGCCGA AATAGAGAAG GGGACTCCCT GCCAGGCGAT GCCCTCCGAG GCCGGGAGCA GCATCTGCTT CAACGACATC TGGTTCGCCT ACAGCGAGGA CGCATTTGTG TTGAAGGGCT TCTCCCTGCA GATGAGGCGC GGCGAGAAGG TGGCGCTGGT CGGAGAGACC GGCGGCGGCA AGACCACCGT GACGCGTCTT CTCTCCCGGC TCTACGACGT GAACCGCGGC TCGATAACCG TCGACGGCGC CGACATCCGG GACATCCCGC TGAAGACCCT CAGAAAGCGG ATCGGGGTGG TGCTGCAGGA TCCATATCTC TTTTCCGGGA CCATCGCCTA CAACATCTCG CTCGGGGACC CGGAGGCGCT GAAGCGCGTG GAGCAAGCCG CCGCGGTGGT CGGCGCGGAC CGTTTCATAA GAGAGCTTCC CAAGGGGTTC GAGGAGGAGG TACGGGAGCG CGGGGTGAAC TTCTCGGCCG GGGAGCGGCA ACTGATCTCC TTCGCCCGCG CGGTGGCCTT CGACCCGGAC ATCCTGGTCC TCGACGAGGC GACGGCGAGC GTGGACACGG CGAGCGAGCG CCTGATCCAG CGGGGGCTGG AGGGGTTGAT GCAGGGGAGG ACCACGCTGG TGGTAGCGCA CCGGCTTTCC ACCATCCGCG ACGCCGACCG CATCGTGGTC ATCCATCACG GCGAGAAGAT GGAAGAGGGT AGCCACGCGG AACTGATGGA GGCGAAGGGC GTCTACTACA GGCTTTACCA GCTGCAGTTC AAGGACTAG
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Protein sequence | MHFGGIYEDE IVGKMYDRRL MGRFFPYLLP YRRLIAAALI LLPFVAAAKL VQPWILKLAI DDHITKGVMA GLPSLAALFL GVILAESLLM FAQVYLLQYV GQKVMYDIRV ALFSHLQRLS ARFFDRTPVG SLVSRLTSDI EVLGEMFAAG IVTVVGDVLV LAGIVAIMLF MNVKLSLVTF SVLPFLVWAA FSFRKWMRAA FRQVRARQSN LSAFLTESIG GMAVVQLFNR EKDEAREFRR LNTAYMESNL PVITWDAALF AVVETLSSVA VALIIWYGGG EIVRGTLSFG ALVAFIQYIE RFFSPIRDLS AKYSVMQGAM ASLERIFTLL DNQALEPALL NERSSAEIEK GTPCQAMPSE AGSSICFNDI WFAYSEDAFV LKGFSLQMRR GEKVALVGET GGGKTTVTRL LSRLYDVNRG SITVDGADIR DIPLKTLRKR IGVVLQDPYL FSGTIAYNIS LGDPEALKRV EQAAAVVGAD RFIRELPKGF EEEVRERGVN FSAGERQLIS FARAVAFDPD ILVLDEATAS VDTASERLIQ RGLEGLMQGR TTLVVAHRLS TIRDADRIVV IHHGEKMEEG SHAELMEAKG VYYRLYQLQF KD
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