Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0020 |
Symbol | |
ID | 8135319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 27918 |
End bp | 29327 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644867637 |
Product | putative oxidoreductase |
Protein accession | YP_003019865 |
Protein GI | 253698676 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAACG ATTTGTCCCC CAAAGAGAGG ATGGCGATAG AGCGGGTCCA CATGCCGGAG CTTCCGGCGG ACGAAAGAAG CAAGAACTTC GAAGAGGTGA ACCAGGGGCT CTCCCCAGAG CAGGCTGTCG CCGAGGCGCA GCGCTGCCTG CAGTGCAAGA GCAGGAACTG CGTGGCCGGG TGCCCGGTCG GCGTTTCCAT TCCCGAATTC ATCGACGCGC TGGCGAGCGA CGACATGCCC AGGGCGGCGC AGGTGCTGCG CGGCGACAAC GCGCTTCCCG CGGTCTGCGG CAGGGTATGC CCCCAGGAGA CGCAGTGCGA GGCGCTCTGC GTGCGCGGCA AGAAGGGGGA CGCGGTGGCT ATCGGCTACC TGGAGCGCTA CGTGGCCGAC TGGGCCATGC AGCACCCCGA CGAGCTGATA ACGGAAGATG CCCCCGCGCC GACCGGCAAG TCGGTGGCAG TGGTCGGCTG CGGCCCGGCC GGGCTCACCG CCGCCGGCGA GTTGGCCCGC CAGGGGCACA AGGTGACCAT CTTCGAGGCG CTGCACGACA CGGGCGGGGT GCTCCGCTAC GGCATCCCCG AATTCCGGCT TCCCAAGGAG ATCATCGACC GCGAGGTGGC GGTCTTGAGC CGGATGGGGG TTGCCATCGA GTGCAACGTC ATCATCGGCA AGACCCTCAC CATCCCGCAA CTGCGCAGCG AGTTCGACGC CGTCTTCATC GCCAACGGCG CCGGCCTCCC CACGATGCTG AACATACTTG GCGAGAACCT GAAGGGGGTC TACGCCGCCA ATGAATTCCT CACCCGCGTG AACCTCATGG AGGCCGGACG CAGGGCCGAC AGCTCCACAC CCATCCTGCA GCGGGACGAG GTCGCGGTCA TCGGCGGCGG CAACACCGCC ATGGACTGCG TGCGCACCGC CCGCAGGCTC GGGGCCAAGC GCGCCATGAT CGTCTACCGC CGCGGCGAGG CCGAGATGCC GGCCAGGGTC GAGGAGATCA AGCACGCCAA GGAGGAAGGG GTCGAGTTCA TCATGCTGAC CGCCCCCGTC GCCATCGTCG CCACCGAGGA CGGCTGGGTC TCCGCTCTGC GCTGCCAAAA GATGGAGCTA GGTCCCGCCG ACGACTCCGG CCGACGCAGG CCCCAGGCGA TAGAAGGTTC CGAGTTCGAC CTTCCCGCCG GGATCGTGAT CAACGCCGTC GGCACCAGCG CCAACCCGCT CCTCACCGCG ACGGCTCCCG ACCTCACCCT CAACAAGTGG GGCAACATCG TCACCAACGA CGAGGGGGAG ACCAGCATCC CCGGCGTCTT CGCCGGCGGC GACATCGTCA GGGGCGGGGC CACGGTCATC CTGGCCATGG GCGACGGCAA GCGCGCCGCA GCCGCCATCG ACAAGTATCT GAAAGGCTAG
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Protein sequence | MSNDLSPKER MAIERVHMPE LPADERSKNF EEVNQGLSPE QAVAEAQRCL QCKSRNCVAG CPVGVSIPEF IDALASDDMP RAAQVLRGDN ALPAVCGRVC PQETQCEALC VRGKKGDAVA IGYLERYVAD WAMQHPDELI TEDAPAPTGK SVAVVGCGPA GLTAAGELAR QGHKVTIFEA LHDTGGVLRY GIPEFRLPKE IIDREVAVLS RMGVAIECNV IIGKTLTIPQ LRSEFDAVFI ANGAGLPTML NILGENLKGV YAANEFLTRV NLMEAGRRAD SSTPILQRDE VAVIGGGNTA MDCVRTARRL GAKRAMIVYR RGEAEMPARV EEIKHAKEEG VEFIMLTAPV AIVATEDGWV SALRCQKMEL GPADDSGRRR PQAIEGSEFD LPAGIVINAV GTSANPLLTA TAPDLTLNKW GNIVTNDEGE TSIPGVFAGG DIVRGGATVI LAMGDGKRAA AAIDKYLKG
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