| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4283 |
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| Symbol | |
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| ID | 8135286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4846308 |
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| End bp | 4847750 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 644867605 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003019833 |
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| Protein GI | 253690643 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC GCGCATATGA ATTATTAATT ATTTTCAGTT CAACCTTACT AATGAGTTAC
TTAGGTTTGT CTTTTCGGCT ACTTGACGAT ACCTCCCTAT TCTGGCCAGC AGACATTCTC
TTATTTTGCT TTCTCATACG CTATCGCAGT CGAGATAAAA GCATAAAAAA CAAATTATTG
CATAGCGTTA TTTTATGCAT AGTCGGTTTT CTCGGCATGC TGCTACCCGC TATTTATCTT
GAAAACAATC AATCTTTTTT TGAAAAAATT ATTCACTGCG CGATAAGTTC AGTTTTTTTC
ATTACTGCAT GGATTACATT AATTATATTT TTTAAGATAA GGGGTAAAAC TTACAGTCAA
TTAAGTAAAA ACTATATTTT CTTTATATTT ATTTCTATTT CTATAGGATC CATTTTTTCA
GCTTTATTTT ATGGGATGTA TTTGTCCACA AAAACCAGTG ATGACAATGT TTTCATCCTT
TCAAGAAAGT GGTTTAGCGA AGAGCTAAGT TCTGGTGTTA TTTTCGTTTT TTTATTCCTA
AAAGTGACAA GGAATGTTAA AAACATTTTT AAAATATCAA CATCTTCAAT AAAAAAAACA
TTCAAGAAAC CATTATTCAT ACTTTACCCT ATCATTATTA TCTTTTGCAT AGCGTCGTTA
AACATCACAC TCAGCGTATT GGCAATATTG CCATTAATTT ATCTTTCGTT ATCCCATTCA
TTTAACAAGA TTATTTTAAT GTGCACTGCA ACGGGCATTG CACTAAATTA CATCTATATA
AACAGATTAA TAAATGTTCA TGACACAATA GAAAAGGAGT ATTTGTTCGA ATTATCTTAT
TTATTTCAAA TCAACACTTC AGTGATTATC ATCACCGTTC TTATCGCCTC TTTCTTTATT
AACAAAAACA GAAAGAACAT AAAAAGAATA GAATTAATCA GCAACCATGA TGCTCTAACT
GGCATGTTAA ATAGACGTTC ACTCAATCAG CACATGATGA ATATCATTAA CTCCACACGT
GATGGGGATA ATAAAATCAT GTCTCTGCTT GTTCTTGATA TTGACCATTT TAAAAAAGTG
AATGATACCT ATGGGCATGC TGTAGGCGAT AACGTCATCA GAGAGTTTTC TACAACGCTT
AAGCAATATA CCCGACCTCA AGACCTGCTC TGTCGATGGG GTGGCGAAGA ATTTTTAATC
ATAATTCAAG GTCTCTCCGT CAACGACTGC TTAGATATCG CAGAGAGAAT ACGGTCTATT
ATAGAAGGGG CTCCATTAGC GATTTCAGAT GGTCATATTG TTCGATGCAC AACCAGTATA
GGAGTCAGTT TTTTTCAGCT GGAAAGAATT GAGGATTTCC ATGAAGCGTT TAAGGAAGCA
GATGAATTAT TGTACATGGC AAAAGAGCAA GGACGTAATC GCGTAAATTC GGTACAAAAC
TAA
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| Protein sequence | MKIRAYELLI IFSSTLLMSY LGLSFRLLDD TSLFWPADIL LFCFLIRYRS RDKSIKNKLL
HSVILCIVGF LGMLLPAIYL ENNQSFFEKI IHCAISSVFF ITAWITLIIF FKIRGKTYSQ
LSKNYIFFIF ISISIGSIFS ALFYGMYLST KTSDDNVFIL SRKWFSEELS SGVIFVFLFL
KVTRNVKNIF KISTSSIKKT FKKPLFILYP IIIIFCIASL NITLSVLAIL PLIYLSLSHS
FNKIILMCTA TGIALNYIYI NRLINVHDTI EKEYLFELSY LFQINTSVII ITVLIASFFI
NKNRKNIKRI ELISNHDALT GMLNRRSLNQ HMMNIINSTR DGDNKIMSLL VLDIDHFKKV
NDTYGHAVGD NVIREFSTTL KQYTRPQDLL CRWGGEEFLI IIQGLSVNDC LDIAERIRSI
IEGAPLAISD GHIVRCTTSI GVSFFQLERI EDFHEAFKEA DELLYMAKEQ GRNRVNSVQN
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