Gene PC1_4280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4280 
Symbol 
ID8135283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4843604 
End bp4843963 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content44% 
IMG OID644867602 
Productputative lipoprotein 
Protein accessionYP_003019830 
Protein GI253690640 
COG category[S] Function unknown 
COG ID[COG4259] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATCTC ATAAGAAAAT TGTCCTGCTG CTTGCAGCGA CAGTACTGGC TGGCTGTGCG 
TCCCAGCCAA AAACCATTTA CAGCTGGGAA AAATATCAGC CGGCTCTTTA CGATTACTAT
CAGCAAGATA AAGTTGGCCC TGAGCAGCAG ATTCTTGCTT TGAATGAATC GATCGAAAAA
GCGAAAGCCG CAAATAAACC TGTCCCACCG GGACTCTATG CTCAACTTGG GTTGCTGTAT
GCCAACACTG GCCGTGATAG CGAAGCTCGC CAACAGTTTG AAACTGAAAA AGCGAAATTC
CCTGAATCAG CACCTTTTAT GGACTTTCTG TTGAGTAAAA ATAAAGGGAG CATTAAATGA
 
Protein sequence
MLSHKKIVLL LAATVLAGCA SQPKTIYSWE KYQPALYDYY QQDKVGPEQQ ILALNESIEK 
AKAANKPVPP GLYAQLGLLY ANTGRDSEAR QQFETEKAKF PESAPFMDFL LSKNKGSIK