Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4280 |
Symbol | |
ID | 8135283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4843604 |
End bp | 4843963 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644867602 |
Product | putative lipoprotein |
Protein accession | YP_003019830 |
Protein GI | 253690640 |
COG category | [S] Function unknown |
COG ID | [COG4259] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATCTC ATAAGAAAAT TGTCCTGCTG CTTGCAGCGA CAGTACTGGC TGGCTGTGCG TCCCAGCCAA AAACCATTTA CAGCTGGGAA AAATATCAGC CGGCTCTTTA CGATTACTAT CAGCAAGATA AAGTTGGCCC TGAGCAGCAG ATTCTTGCTT TGAATGAATC GATCGAAAAA GCGAAAGCCG CAAATAAACC TGTCCCACCG GGACTCTATG CTCAACTTGG GTTGCTGTAT GCCAACACTG GCCGTGATAG CGAAGCTCGC CAACAGTTTG AAACTGAAAA AGCGAAATTC CCTGAATCAG CACCTTTTAT GGACTTTCTG TTGAGTAAAA ATAAAGGGAG CATTAAATGA
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Protein sequence | MLSHKKIVLL LAATVLAGCA SQPKTIYSWE KYQPALYDYY QQDKVGPEQQ ILALNESIEK AKAANKPVPP GLYAQLGLLY ANTGRDSEAR QQFETEKAKF PESAPFMDFL LSKNKGSIK
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