| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4273 |
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| Symbol | |
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| ID | 8135276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4835832 |
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| End bp | 4836560 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644867595 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003019823 |
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| Protein GI | 253690633 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTA CCGTTATCAC CGATAACCTC GGCTATTTGA TGTGGGGCAC GTTTCCGGAG
GGCCCGCTGG GCGGCGCGGC GCTGACGCTG CTGATGAGTC TGCTGGCGGG CGTCGCGTCT
GCCGCTTTGG GGACAATATT GGGCGTGGCG CTGGCGATGT CGCGAGGCGT ATGGAGCGCG
CTGTTGGCGA TGGTGCTAGG GTTTTTTCGG GCGATTCCCG TCATCATGCT GATTTTCTGG
ACCTACTTCC TGCTGCCGAT CGTTTTTGGC GTCGATATCC CTGAAATTAC TACGGTGGTG
TGTGCGCTGG CGCTGATCGC CTCGGCGTAT CTGGCGCATG GCGTGAAGGC GGGTATTGTC
GCGATTGGAC GCGGCCAGTG GCAGGCTGGG CTCTCGCTGG GATTAAGCCG CTGGCAGGTA
CTGTGGCAGA TTGTCCTGCC GCAGGCGCTG AGGATGATGG TGCCCTCCTT CATAAACCAG
TGGATTTCCC TGATTAAAGA CACCTCGCTG GCCTACATTG TCGGTGTCGG CGAGCTGACG
TTTCTCGCTA CCCAGGTCAA TAACCGCAGC ATGGTTTATC CGATGGAGGT TTTCCTGTTT
GTCGCACTGG TCTACTTCGT GTTTTGCCTG TCGCTGGAAC TGCTGGCTAA CCGGGTTAAC
GCCCGTTTTA ACCAGCAGGA AAAACCGCCG AAGCGTCGTC TGCTGTGGTG GCGGAATAAA
CCAGCCTGA
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| Protein sequence | MDFTVITDNL GYLMWGTFPE GPLGGAALTL LMSLLAGVAS AALGTILGVA LAMSRGVWSA
LLAMVLGFFR AIPVIMLIFW TYFLLPIVFG VDIPEITTVV CALALIASAY LAHGVKAGIV
AIGRGQWQAG LSLGLSRWQV LWQIVLPQAL RMMVPSFINQ WISLIKDTSL AYIVGVGELT
FLATQVNNRS MVYPMEVFLF VALVYFVFCL SLELLANRVN ARFNQQEKPP KRRLLWWRNK
PA
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