| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4272 |
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| Symbol | |
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| ID | 8135275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4835087 |
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| End bp | 4835830 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644867594 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003019822 |
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| Protein GI | 253690632 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACGG CGCTGCAATC GCTTGAGTCG TGGCTGTTGG CTCCTCAATA CCTCATCTGG
CTGTGGCACG GTTTCCTGAT TACGCTGGGT ATTTCCCTCA GTACGATCGC CTTGTCCACG
GTGCTGGGCT TTCTGTTGGC AGCCGCCAGA GACAGTCAGG TTCGGGTGCT GAGCAGCGTC
GTTGTCGCTT ACAGCTCGCT ATTCCGTAAT ACGCCGCTGC TGGTGCAGCT ATTTTTCTGG
TATTTCGGTG CCGGTCAGCT TTTTCCCTCA GAGATGATGC AATGGCTGAA CACTCCGCAT
GTTATTTCGC TGTTGGGCAT GACGTTAGCG TGGCCCTCTT TTGAGTTTCT GGCGGGCTTG
GCTGGGCTGA CGCTCTACTC CAGCGCGTTT ATTGCCGAGG AAATTCGCGC CGGTATTCGC
GGTGTGGCGC GTGGACAGAA GTACGCGGCG CATGCTCTGG GGTTAACCGG TTGGCAATCC
ATGCGCTATG TGGTGTTGCC GCAGGCGCTA AAAATCGCCC TGCCGCCGCT GCTTGGGCAA
TACATGAATA TCGTTAAGAA CTCGTCGTTG ACGATGGCGA TTGGCGTCGC TGAATTGTCC
TACGCGTCGC GTCAGGTGGA GACGGAAACC TTACGTACTT TTCAGGCGTT TGGCGTGGCG
ACGGTGTTGT ACATCGTGAT TATTGCCGTG ATGGAAGGCT GGGGCATGTG GCGTCAGCAG
CGTAGTTTGG CGGAGAGACA CTAA
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| Protein sequence | MDTALQSLES WLLAPQYLIW LWHGFLITLG ISLSTIALST VLGFLLAAAR DSQVRVLSSV
VVAYSSLFRN TPLLVQLFFW YFGAGQLFPS EMMQWLNTPH VISLLGMTLA WPSFEFLAGL
AGLTLYSSAF IAEEIRAGIR GVARGQKYAA HALGLTGWQS MRYVVLPQAL KIALPPLLGQ
YMNIVKNSSL TMAIGVAELS YASRQVETET LRTFQAFGVA TVLYIVIIAV MEGWGMWRQQ
RSLAERH
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