Gene PC1_4270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4270 
Symbol 
ID8135273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4832994 
End bp4834031 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content51% 
IMG OID644867592 
Producthypothetical protein 
Protein accessionYP_003019820 
Protein GI253690630 
COG category[S] Function unknown 
COG ID[COG2990] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGCT ACGATTTCGT CATCTTAATC ATGGTGACAT TCATGGACAT TACTTCTACA 
CAATCACTTG GAAATACGAA GACTCAGTTT CGGGCCGCAT TTTCCCTGTT GCTGGCATTG
GCAACGGGTA AACACAAGCC GGATCGGCGC TGGGAGAGTC TCCAATGGCG TATAAAATAT
ACCGCCCGAG TGATGCTTCA CCCGCTGCTG ACCATGAAAT GGCTCAGTTT TATCGTCGAT
TATCCCGTAC AGGATATTTT TCGACGTGAC GGCAATGAGC TTTATAGTAA GCTCCAGCGC
CCCTACCTGA TGGCGTCGCT ACCGACACAC CAAACTTGTA CGGCCTTAAT GGATCATTAC
CGCTTTATTC AAACGTTGCC GTTACATCGC CAGCGCTTGT TATATAGCCA GAACGGGGGC
GGTAACGTGC TGGCCAGTTT TCAGGGAAAA AGCGATGAAA ATTACACGCT TCGCCTGATG
ACTAACGATC AAATGTGTAA GGAAGGCGAG CTCTCCCTAC AGCTTGAGAA CAGCGAGCAC
GTGCTGGCAC AGATGACGTT CTCCATCCTG CGCATTGAAG GGGAAATGGG CCTGTTTATC
GGTGGGATTC AGGGACCGGA TGCACAAACG CCGCATCAGG TTATTCAGGG CGCGACGCGA
GATTGCCATA GTCTGTTTCC CAAACGTATT CTTCTGGAAG GCCTGCTTAA CCTGGCTCGA
GGTCTTAATC TGGCGCACGT TATCGCGGTC AGTAACGAAA CGCATATCTA TAAACACTGG
CGCTATCGCA GTAAGAAACG CGGTGTTTTT CTGGCCGACT ACAATGCGTT CCTCTTCGCC
CACGGCGGTC AACCGCGACC TGATGGCAAC ATTGCGCTAC CGCTATCTCT GCCGAGAAAG
TCTGAACAGG ACATTCCCAG CCGCAAGCGG GCAGAATACC GCCGACGCTA TGCGCTCTTT
GATGAGGTAG CCTGCCAGAT TAATGACGTA CTCGCCGGTA GTTTGCTGCG TTCCATCAAT
CTATCTAACC GTACCTGA
 
Protein sequence
MSRYDFVILI MVTFMDITST QSLGNTKTQF RAAFSLLLAL ATGKHKPDRR WESLQWRIKY 
TARVMLHPLL TMKWLSFIVD YPVQDIFRRD GNELYSKLQR PYLMASLPTH QTCTALMDHY
RFIQTLPLHR QRLLYSQNGG GNVLASFQGK SDENYTLRLM TNDQMCKEGE LSLQLENSEH
VLAQMTFSIL RIEGEMGLFI GGIQGPDAQT PHQVIQGATR DCHSLFPKRI LLEGLLNLAR
GLNLAHVIAV SNETHIYKHW RYRSKKRGVF LADYNAFLFA HGGQPRPDGN IALPLSLPRK
SEQDIPSRKR AEYRRRYALF DEVACQINDV LAGSLLRSIN LSNRT