Gene PC1_4259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4259 
Symbol 
ID8135262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4818474 
End bp4820708 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content50% 
IMG OID644867581 
Productexopolygalacturonate lyase 
Protein accessionYP_003019809 
Protein GI253690619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTT GTTCTTCACC AAAATGTCAT TCTTTACGGA AACACCGTTC TTCACGCCTC 
GCAGCCGTCG CGTTGACGAA TGCATTACTT TTCAGCTTCA GCACACACGC CGCGACAGAA
TCAACGCCAG TCTGGCACGG TATCGCCTTT GGTCAGTCAA CAGACGTAAA CTTTTCATCC
AATGTCCTGC CGGAAAAAAT TGGCGTCAAC GATGTCACCA TTAACGGCAA GAAATTAGCC
CCGGGGGATA ACGCTGATTT GTCCGCCCCC ATCACGATTG AGAGCCGTGG CGGAAAGATT
GCCAACACCC ATGACGGGTT GACGTTCTTC TATACGCAAC TGCCTGCCAA TGTGAATTTT
ACGCTTCAGT CTGATATTAC CGTGGAACAG TTTGGGCCAG AAAACGGTGC CAAACCTGCA
GCTCAGGAAG GGGCGGGAAT TCTGGTGCGC GATATTATCG GCGTACCGCG TCAGAATCCG
CTGAAAGAAG GGTATGAAGA GTTCCCTGCC GCGTCCAACA TGGTGATGAA CGCCATCATG
ACGCAGGATA AAAAGTCTCA TACCGAAATT AAACTACAGG CTATTTTGCG CAATGGCGTG
ACGCAGCCGT GGGGCAATGC GGGCGCGAAA ATTACCAAAA CCAGCTATCA GGAAAATGTG
AATCTGGAGC AAACGCCGAC GTTCCGGCTG AAACTGGAGC GTACCAACGA TGGCTTCATC
ACCTCTTATG CACCGAAAGG CACGGATAAC TGGGTATCGA AAGAAGTCAA AGGCGCGGAC
GTCGTCACCA AGCTGGATAA AGACCACTAC TACGTCGGTT TCTTTGCCTC CCGTAATGCC
AAAATCACCG TCAGCAATGC ACAGTTGACC ACTACGCCAG CACAAACCAA AGCCTCACCG
GCGTTTAAAG CTAAGGATTA CGATCCTTTA CTTCAGGTGA TGTCATCGCC TAAAACCACC
AGCGAACACT ACGTCGTGCA GGCCAAAGCC AATTACAACG GCACGATCGC GGTTTCACAA
GACGGTAAAT CTCTGGGTGA TGCCAAGCAG ATAAAAGCGG GAGAGACCTT CTCTCTGCCA
GCGAAAATTG CCGGCAACGG TGCTGAGTTC AAGATAGCCT ACCAGCCTGT GGAAGGGGAT
GATAAAGCGG TAAAAGAGAG CACATTGAAA GTTGAAAGAG TGGCTTACGC AGACGCTAAA
AATCTGTATG TTTCGCCACA AGGTTCAGCC AGCAATGACG GCAGTAAAAA TGCCCCGCTC
GATTTAGCCA GCGCCGTCGC CGCTCTACCA GCAGGCGGCA CCATTTGGCT CAACGATGGC
GATTACAGCG CGTCTGAAAT CCCTGTCAGT GCCAGCGGCC AGCAAAAAGC CGTCAAGAAC
CTATTTGCTG TCGGTAATAA AGCCGTCATT CACGGCCTGC AACTGAAAGC GAGCCATTGG
CATGTTAAAG GGATTGAAAT CACCGAGAAA CCGTTCCGTA TCGAGGGAAG CTACAACACC
ATCGAACGCG TTATAGCGCA CCACGCTGAC GATACTGGTA TTCAGGTGAC CTCGACGGCC
GATGTAGGCA GACCGCTGTG GGCCAGCCAT AACCTGATCC TGAACTCAGA ATCTCACAGC
AATCAGGATC CAGGCAAAAT TAACGCCGAC GGTTTCGCGG TGAAAATGCG TGTCGGTGAA
GGCAACGTGA TTCGCGGCGC GTTCTCGCAC AATAACGTCG ATGACGGCTT CGACCTGTTT
AACAAAATCG AAGACGGCGC AAACGGCGTT GTGGTGATCG AGAACTCAAT TGCCATGAAC
AACACCAGCA ACGGCTTCAA AATGGGTGGG GAAGGTCAGC CAGTGGCGCA TCAGGTTAAA
AACAGCATTG CTGTGGGTAA CAAACTTGAT GGTTTCACCG ACAACTTCAA CCCTGGCGCC
TTGATCGTTG AAAATAACAT TGCGTTAGAT AACGAACGCT TTAACTTTAT TTTCCGTCCA
AGCCCTTACT CTGGCCCGGA AAAACAAGGC GTCTTCAAGA ACAACATGTC GCTGAAAACC
AAAGCGGGTA AATATGATGA TGCGGTTGTC GGCAGTATCG ATAACACCAA CTACTTCATC
AAAGGCGACC GCTCTGTTAA CGCGCAAGGT AAGGAAATCA CAGTAAATAA TTTCGTGTCG
GTAACCATCC CTGAAACGTT TACGCGTGAT GCCAAAGGCA ATCTGGTACT TGGTGACTTC
CTGAAGAAAA AATAA
 
Protein sequence
MKRCSSPKCH SLRKHRSSRL AAVALTNALL FSFSTHAATE STPVWHGIAF GQSTDVNFSS 
NVLPEKIGVN DVTINGKKLA PGDNADLSAP ITIESRGGKI ANTHDGLTFF YTQLPANVNF
TLQSDITVEQ FGPENGAKPA AQEGAGILVR DIIGVPRQNP LKEGYEEFPA ASNMVMNAIM
TQDKKSHTEI KLQAILRNGV TQPWGNAGAK ITKTSYQENV NLEQTPTFRL KLERTNDGFI
TSYAPKGTDN WVSKEVKGAD VVTKLDKDHY YVGFFASRNA KITVSNAQLT TTPAQTKASP
AFKAKDYDPL LQVMSSPKTT SEHYVVQAKA NYNGTIAVSQ DGKSLGDAKQ IKAGETFSLP
AKIAGNGAEF KIAYQPVEGD DKAVKESTLK VERVAYADAK NLYVSPQGSA SNDGSKNAPL
DLASAVAALP AGGTIWLNDG DYSASEIPVS ASGQQKAVKN LFAVGNKAVI HGLQLKASHW
HVKGIEITEK PFRIEGSYNT IERVIAHHAD DTGIQVTSTA DVGRPLWASH NLILNSESHS
NQDPGKINAD GFAVKMRVGE GNVIRGAFSH NNVDDGFDLF NKIEDGANGV VVIENSIAMN
NTSNGFKMGG EGQPVAHQVK NSIAVGNKLD GFTDNFNPGA LIVENNIALD NERFNFIFRP
SPYSGPEKQG VFKNNMSLKT KAGKYDDAVV GSIDNTNYFI KGDRSVNAQG KEITVNNFVS
VTIPETFTRD AKGNLVLGDF LKKK