Gene PC1_4258 details

Gene Information

• Locus tag: PC1_4258
• Symbol: atpC
• ID: 8135261
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4817640
• End bp: 4818059
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644867580
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_003019808
• Protein GI: 253690618
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATGA CTTACCATCT GGATGTCGTG AGTGCAGAAC AGCAAATGTT CTCCGGTCTG 
GTGCAGAAGA TCCAGGTAAC GGGGAGCGAA GGCGAACTGG GTATTTATCC GGGACATGCC 
CCTCTGCTTA CTGCCATTAA ACCTGGTATG GTTCGTATCG TTAAGCAGCA CGGTGAGGAA 
GAGTATATTT ATCTTTCTGG CGGCATCCTT GAGGTGCAGC CGAATACCGT TACCGTACTG 
TCTGATACCG CAATCCGTGG GCAGGATCTG GATGAAGCTC GTGCGCTGGA AGCGAAACGT 
AAAGCTGAAG ATCATATCCG TAATTCGCAT GGTGATGTGG ATTATGCTCA GGCTTCAGCA 
GAGCTGAGCA AAGCGATTGC GAAGCTGCGC GTTATCGAGC TGACCAGAAA AGCGATGTAA 

 

Protein sequence

MAMTYHLDVV SAEQQMFSGL VQKIQVTGSE GELGIYPGHA PLLTAIKPGM VRIVKQHGEE 
EYIYLSGGIL EVQPNTVTVL SDTAIRGQDL DEARALEAKR KAEDHIRNSH GDVDYAQASA 
ELSKAIAKLR VIELTRKAM