Gene PC1_4251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4251 
Symbol 
ID8135254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4811549 
End bp4812349 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content48% 
IMG OID644867573 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_003019801 
Protein GI253690611 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000620558 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTG GAGAAATCTC TACTCCGCAA GAGTATATCA GTCACCACTT GCACCATTTG 
CAGGTAGGGA CGGGTTTTTG GTCGATCAAC GTCGATTCGA TGTTTTTCTC CATTGCTCTT
GGGATCCTCT TTCTGGTTAT CTTTCACCGT GTCGCTAAGC GCGCCACCAG CGGTGTGCCA
GGTAAGCTGC AAACGGCCGT CGAACTGATT ATCGGTTTCG TTGATGGTAC CGTGCGCGAT
ATGTTCCATG GCAAAAGCAA ACTGATTGCT CCTTTGGCGC TGACCATTTT CGTCTGGGTT
TTCCTGATGA ACCTGATGGA CTTGCTGCCT ATCGATCTGT TGCCGCAAGC CTGGGCAGGT
ATCTATAGTC TGCTGGGATA CGATCCGGCG CATGCGTATC TGCGTGCGGT TCCGACGGCT
GACGTTAATA TTACGCTGTC GATGGCGCTT GGGGTGTTTA TCCTGGTTCT GTTCTACAGC
ATCAAAATGA AGGGTCTCGG TGGTTTTGTT AAAGAACTGA CCATGCAGCC GTTCAACCAT
CCAGTATTTA TTCCTATTAA CCTGATTCTT GAAGGTGTCA GCCTGCTGTC CAAACCTATT
TCCTTAGGCT TGCGACTGTT TGGCAATATG TATGCGGGTG AGTTGATCTT CATCCTGATT
GCCGGTCTGT TGCCGTGGTG GTCACAATGG CTGTTAAATG TGCCTTGGGC TATTTTCCAC
ATTTTGATTA TTACGCTTCA GGCTTTTATT TTCATGGTTC TGACGGTTGT TTATCTCTCG
ATGGCATCTG AAGAGCATTG A
 
Protein sequence
MAAGEISTPQ EYISHHLHHL QVGTGFWSIN VDSMFFSIAL GILFLVIFHR VAKRATSGVP 
GKLQTAVELI IGFVDGTVRD MFHGKSKLIA PLALTIFVWV FLMNLMDLLP IDLLPQAWAG
IYSLLGYDPA HAYLRAVPTA DVNITLSMAL GVFILVLFYS IKMKGLGGFV KELTMQPFNH
PVFIPINLIL EGVSLLSKPI SLGLRLFGNM YAGELIFILI AGLLPWWSQW LLNVPWAIFH
ILIITLQAFI FMVLTVVYLS MASEEH