Gene PC1_4246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4246 
Symbol 
ID8135249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4806541 
End bp4807002 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content47% 
IMG OID644867568 
ProductDNA-binding transcriptional regulator AsnC 
Protein accessionYP_003019796 
Protein GI253690606 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGAAA TTTATCAGAT CGATAATCTC GATCGCGGCA TTCTTTCCGC CTTAATGGAA 
AATGCACGCA CCCCTTATGC CGAACTGGCA AAACAGTTTT CCGTCAGTCC AGGAACAATC
CACGTTCGAG TGGAAAAAAT GAAACAGGCG GGCATCATTG TCGGCACGCG TCTGGATGTG
AATCCAAAAC AGCTGGGCTA TGACGTGTGC TGCTTTATCG GCATCATTCT AAAAAGCGCC
AAAGATTATC CTTCAGCGCT GGAGAAGCTA AACAATCTGG AAGAAGTGGT TGAGGCTTAC
TACACCACCG GGCATTACAG TATCTTTATT AAGGTCATGT GTCGTTCGAT CGAGGCGTTG
CAACACGTAC TTATCAACAA GATCCAAACA ATTGATGAAA TTCAGTCCAC CGAAACGCTC
ATCTCCCTGC AAAACCCCAT TATGCGGACG ATCGCGCCGT AA
 
Protein sequence
MAEIYQIDNL DRGILSALME NARTPYAELA KQFSVSPGTI HVRVEKMKQA GIIVGTRLDV 
NPKQLGYDVC CFIGIILKSA KDYPSALEKL NNLEEVVEAY YTTGHYSIFI KVMCRSIEAL
QHVLINKIQT IDEIQSTETL ISLQNPIMRT IAP