Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4220 |
Symbol | glnA |
ID | 8135219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4771023 |
End bp | 4772432 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644867538 |
Product | glutamine synthetase |
Protein accession | YP_003019770 |
Protein GI | 253690580 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0174] Glutamine synthetase |
TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCAG AACATGTTTT GACGATGCTG AATGAGCACG AAGTGAAGTT TGTTGATTTA CGCTTCACGG ATACTAAAGG TAAAGAGCAG CACGTCACCA TTCCGGCTCA TCAAGTCAAT GCCGACTTCT TCGAAGAAGG TAAAATGTTT GATGGTTCCT CGATTGGCGG CTGGAAAGGT ATTAACGAGT CAGACATGGT TCTGATGCCA GATGCCAGCA CCGCGATGAT CGATCCGTTC TTCGAAGATT CCACGCTGAT CATTCGTTGT GACATCCTTG AGCCAGGCAC CATGCAGGGC TACGATCGTG ACCCACGTTC TATCGCAAAA CGTGCAGAAG ATTTCCTGCG TTCTTCCGGC ATTGCCGATA CCGTCCTGTT CGGGCCAGAG CCAGAATTCT TCCTGTTCGA TGACATCCGT TTCGGCAGCA GCACTTCTGG TTCTCACGTT GCTATCGACG ACGTCGAAGC TTACTGGAAC TCCGGTAAAG AATACGAAGG CGGTAACAAA GGTCACCGTC CAGGTCTGAA AGGCGGCTAC TTCCCAGTTC CACCAGTCGA TTCATCACAG GACATCCGTT CTGCTATGTG TCTGACCATG GAGCAAATGG GTCTGGTTGT TGAAGCTCAC CACCACGAAG TGGCAACTGC TGGTCAGAAC GAAGTGGCTA CCCGCTTCAA CACCATGACC AAAAAAGCTG ACGAAATTCA GATCTACAAA TATGTCGTGC ATAACGTAGC TCACGCTTAC GGTAAAACCG CGACCTTCAT GCCAAAACCA ATGTTCGGTG ATAACGGTTC TGGTATGCAC TGCCACATGT CTCTGTCTAA AGACGGTACT AACCTGTTCG CTGGCGACAA ATACGGCGGC CTGTCTGAAC TGGCTCTGTT CTACATCGGC GGTGTTATCA AGCACGCTAA AGCCATCAAC GCCCTAGCGA ACCCGACCAC CAACTCCTAC AAGCGTCTGG TCCCAGGCTA CGAAGCCCCA GTTATGCTGG CTTACTCTGC CCGTAACCGT TCTGCTTCAA TCCGTATCCC GGTTGTTGCC AGCCCGAAAG CACGTCGTAT CGAAGCGCGC TTCCCGGATC CAGCAGCTAA CCCATATCTG TGCTTCGCTG CACTGCTGAT GGCTGGCCTC GACGGCATCA TCAACAAAAT CCACCCTGGC GATGCTATGG ACAAAAACCT GTACGACCTG CCGCCAGAAG AAGAAGCAGA GATTCCAAAA GTTGCAGGTT CTCTGGACGA GGCCCTGGCT GCACTGAACG AAGACCGCGA GTTCCTGACC CGTGGTGGCG TGTTCACCGA CGACGCTATC GAAGCGTATA TCGAACTGCG TAAATCTGAG ATTGACCGCG TTCGTATGAC GCCGCACCCA GTTGAGTTCG AACTGTACTA CAGCGTTTAA
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Protein sequence | MSAEHVLTML NEHEVKFVDL RFTDTKGKEQ HVTIPAHQVN ADFFEEGKMF DGSSIGGWKG INESDMVLMP DASTAMIDPF FEDSTLIIRC DILEPGTMQG YDRDPRSIAK RAEDFLRSSG IADTVLFGPE PEFFLFDDIR FGSSTSGSHV AIDDVEAYWN SGKEYEGGNK GHRPGLKGGY FPVPPVDSSQ DIRSAMCLTM EQMGLVVEAH HHEVATAGQN EVATRFNTMT KKADEIQIYK YVVHNVAHAY GKTATFMPKP MFGDNGSGMH CHMSLSKDGT NLFAGDKYGG LSELALFYIG GVIKHAKAIN ALANPTTNSY KRLVPGYEAP VMLAYSARNR SASIRIPVVA SPKARRIEAR FPDPAANPYL CFAALLMAGL DGIINKIHPG DAMDKNLYDL PPEEEAEIPK VAGSLDEALA ALNEDREFLT RGGVFTDDAI EAYIELRKSE IDRVRMTPHP VEFELYYSV
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