Gene PC1_4217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4217 
Symbol 
ID8135216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4767555 
End bp4767992 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content55% 
IMG OID644867535 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_003019767 
Protein GI253690577 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCGC TAATTCAGCG GGTTTCCAGC GCCAGCGTTA CGGTGGAAGG CAAGGTCATT 
GGGGAGATCG ATAAAGGTTT GCTGATCTTG CTGGGCGTTG AGCAGGGCGA TGACGAACAA 
AAAGCCACGC GCCTCTGTGA GCGTGTGTTG GGCTACCGCA TATTCGGTGA CGATGATGGG 
AAAATGAATC TCAATGTTCG TCAGGCTGGC GGCAATGTGC TGGTGGTTTC GCAGTTTACG 
CTGGTGGCCG ATACGCAGCG TGGCATGCGG CCTGGGTTTT CTCGCGGTGC ACATCCCTCG 
GAGGCCGATC GCCTCTATCA GTATTTTGTC GGACAGTGTC GTGAGCAAGG CGTTCACACG 
GAAACGGGGC AGTTTGCGGC AGATATGAAA GTGGCATTGG TGAATGACGG CCCGGTGACG 
TTCTGGCTAC AGACATAA
 
Protein sequence
MIALIQRVSS ASVTVEGKVI GEIDKGLLIL LGVEQGDDEQ KATRLCERVL GYRIFGDDDG 
KMNLNVRQAG GNVLVVSQFT LVADTQRGMR PGFSRGAHPS EADRLYQYFV GQCREQGVHT 
ETGQFAADMK VALVNDGPVT FWLQT