Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4212 |
Symbol | |
ID | 8135211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4760146 |
End bp | 4760838 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644867530 |
Product | tRNA guanosine-2'-O-methyltransferase |
Protein accession | YP_003019762 |
Protein GI | 253690572 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCTC AACGTTATGC ACGCATAAAA GAAATGCTCA ACTGCCGTCA GCCCGATCTG ACGATTTGCA TGGAGCAGGT GCATAAGCCC CACAACATTT CTGCCGTTAT CCGTACCGCA GATGCCGTCG GCGTACATCA GGTCCATGCG ATTTGGCCCA CCAGCCGGAT GAAAACGCTG GTTTCCTCCG CCGCAGGCAG CAATAGCTGG GTTCAGGTGA AAACTCATCG CAATATCGGT GATGCAGTCG GCCATCTGAA AGCAGAAGGC ATGCAGGTTC TGGCGACCAA TTTGTCTGAA CACGCGGTCG ATTTTCGGGA AATTGATTAC ACCCGCCCGA CCTGCATTCT GCTCGGACAA GAAAAAACCG GGATTACTGC CGAAGCGCTC AAGCTGGCCG ATCGGGACAT CATTATTCCG ATGACCGGCA TGGTGCAATC ACTGAATGTC TCCGTAGCCT CGGCGTTGAT CCTGTATGAA GCGCAGCGTC AGCGCCAAAT CGCCGGCATG TACCAGCGTG AAGACAGCCC GCTGGATGAA GAAGAGCAAC AGCGCCTGCT GTTTGAAGGG GGCTATCCGG TACTGGCACG CGTCGCGAAG CGCAAAGGGC TCCCCCGTCC TTATATTGAC CATCAGGGTC AGATTGTAGC GGATACCCCG TGGTGGGCCG CGATGCAATC GTCGGAGTGC TGA
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Protein sequence | MTPQRYARIK EMLNCRQPDL TICMEQVHKP HNISAVIRTA DAVGVHQVHA IWPTSRMKTL VSSAAGSNSW VQVKTHRNIG DAVGHLKAEG MQVLATNLSE HAVDFREIDY TRPTCILLGQ EKTGITAEAL KLADRDIIIP MTGMVQSLNV SVASALILYE AQRQRQIAGM YQREDSPLDE EEQQRLLFEG GYPVLARVAK RKGLPRPYID HQGQIVADTP WWAAMQSSEC
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