| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4211 |
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| Symbol | |
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| ID | 8135210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4758041 |
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| End bp | 4760140 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867529 |
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| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
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| Protein accession | YP_003019761 |
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| Protein GI | 253690571 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTACATTT TTGAAAGCCT TAATCTGCTG ATTCAACGTT ATCTGCCAGA AGATCAGATC
AAACGTTTAC AGCAGGCTTA CTTAGTTGCA CGTGATGCTC ACGAGGGGCA GACTCGCTCC
AGCGGTGAAC CCTATATCAC ACACCCTGTT GCCGTCGCCT GTATTCTGGC GGAGATGCGT
CTCGATTACG AAACGCTGAT GGCAGCACTG CTGCATGATG TCATAGAAGA CACCCCCGCC
ACCTATCAGG ACATGGAACA GCTTTTTGGT AAAAGCGTTG CTGAACTGGT AGAGGGCGTG
TCCAAGCTGG ATAAACTGAA GTTCCGCGAT AAGAAAGAAG CGCAGGCTGA AAACTTTCGC
AAAATGATCA TGGCGATGGT GCAGGACATT CGCGTCATCC TGATCAAACT CGCAGACCGT
ACCCATAACA TGCGTACACT GGGCTCATTA CGCCCAGACA AACGTCGCCG CATTGCCCGC
GAAACACTGG AAATATACAG TCCGCTGGCA CACCGACTGG GTATCCATCA CCTCAAAACC
GAGTTGGAAG AACTGGGTTT TGAGGCGCTG TATCCGAACC GTTATCGCGT CATTAAAGAG
GTCGTCAAGG CCGCGCGCGG TAACCGCAAG GAAATGATCC AGAAAATCCT GTCGGAAATC
GAAGGGCGTT TGACGGAAGC CGGGATTGCC TGCCGCGTCA GCGGCCGCGA AAAACACCTG
TACTCCATCT ACTGCAAAAT GCACCTGAAA GAGCAGCGTT TTCATTCCAT CATGGATATC
TACGCGTTTC GGGTCATCGT CAAAGAGCTG GACACCTGCT ATCGCGTGCT CGGTCAGGTT
CACAGCCTGT ATAAGCCGCG CCCGGGTCGG GTGAAAGACT ATATCGCTAT TCCCAAAGCC
AACGGCTATC AATCGCTGCA CACGTCGCTG ATTGGTCCGC ACGGCGTGCC GGTTGAAGTA
CAAATTCGCA CCGACGACAT GGATCAAATG GCGGAAATGG GTGTCGCCGC GCACTGGGCT
TATAAAGAAG GTGAAAGTAG CACCACCGCA CAGGTACGCG CCCAACGCTG GATGCAAAGC
CTGTTGGAAC TTCAGCAAAG TGCCGGTAGC TCATTTGAAT TTATCGAAAG CGTGAAGTCC
GATCTCTTCC CTGACGAGAT GTACGTCTTC ACGCCGGAAG GCCGTATTGT GGAACTCCCC
GCAGGTGCGA CGCCCGTCGA TTTCGCCTAC GCGGTACACA CCGATATCGG CCATGCGTGC
GTCGGCGCAC GCGTTGATCG TCAGCCTTAC CCGCTATCAC AGTCGCTCAC CAGCGGCCAA
ACCGTTGAAA TCATCACCGC ACCAGGCGCC AGACCCAACG CCGCATGGCT TAACTTTGTC
GTGAGCTCAA GAGCGCGTTC TAAAATCCGC CAGATGCTGA AAAACCTAAA GCGTGATGAT
TCCGTGAGCC TCGGCCGCCG TTTACTGAAC CACGCGCTGG GCAATGGCCG TAAACTTTCC
GATATCCCTG AGAAATCTAT TCAGCTTGAG CTTGATCGCA TGAAGCTCGC TACGCTGGAC
GATCTGATGG CGGAAATTGG TATGGGTAAT GCCATGAGCG TCGTGGTGGC GAAAAATCTG
CTGAACGAAC AGTCTGAGCT GGGAACCACC GGGTTGCGCA AGTTGCCGAT CAAAGGCGCA
GATGGCGTCA TGATCTCATT TGCCAAATGC TGCCGCCCTA TCCCCGGCGA CCCGATCATC
GCCCACGTCA GCCCCGGTAA AGGGCTGGTT ATCCACCATG AATCCTGTCG CAACATTCGC
GGCTATCAGA AAGAACCTGA AAAATTCATG GCAGTAGAGT GGGATAAGGT GACGGAACAA
GAGTTCATCG CTGAAATCAA AGTCGATATG TTCAACCATC AGGGCGCATT GGCGAACCTG
ACGGCAGCGA TCAATGCCGC GAATTCTAAT ATTCAGAGCA TCAACACGGA AGAGAGAGAC
GGCCGCGTAT ACAGCGCCTT TATCCGTCTC ACCACCCTCG ATCGCGTTCA TCTGGCCAAT
ATTATGCGTA AAATTCGCGT GATGCCGGAT GTCATCAAAG TTAACCGTAA CCGAAATTAA
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| Protein sequence | MYIFESLNLL IQRYLPEDQI KRLQQAYLVA RDAHEGQTRS SGEPYITHPV AVACILAEMR
LDYETLMAAL LHDVIEDTPA TYQDMEQLFG KSVAELVEGV SKLDKLKFRD KKEAQAENFR
KMIMAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAR ETLEIYSPLA HRLGIHHLKT
ELEELGFEAL YPNRYRVIKE VVKAARGNRK EMIQKILSEI EGRLTEAGIA CRVSGREKHL
YSIYCKMHLK EQRFHSIMDI YAFRVIVKEL DTCYRVLGQV HSLYKPRPGR VKDYIAIPKA
NGYQSLHTSL IGPHGVPVEV QIRTDDMDQM AEMGVAAHWA YKEGESSTTA QVRAQRWMQS
LLELQQSAGS SFEFIESVKS DLFPDEMYVF TPEGRIVELP AGATPVDFAY AVHTDIGHAC
VGARVDRQPY PLSQSLTSGQ TVEIITAPGA RPNAAWLNFV VSSRARSKIR QMLKNLKRDD
SVSLGRRLLN HALGNGRKLS DIPEKSIQLE LDRMKLATLD DLMAEIGMGN AMSVVVAKNL
LNEQSELGTT GLRKLPIKGA DGVMISFAKC CRPIPGDPII AHVSPGKGLV IHHESCRNIR
GYQKEPEKFM AVEWDKVTEQ EFIAEIKVDM FNHQGALANL TAAINAANSN IQSINTEERD
GRVYSAFIRL TTLDRVHLAN IMRKIRVMPD VIKVNRNRN
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