Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4201 |
Symbol | |
ID | 8135199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4745577 |
End bp | 4746014 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644867518 |
Product | UspA domain protein |
Protein accession | YP_003019751 |
Protein GI | 253690561 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTACA AACACATCCT TATTGCTGTT GACCTTTCTC CAGAAAGCAA AGTGTTAGTG GAAAAAGCCG TTTCAATGGC GAGACCGTAC AATGCGAAAG TTTCGTTAAT CCACGTTGAT GTGAACTACT CCGATCTCTA CACGGGGCTT ATCGACGTCA ATCTGGGCGA CATGCAACAG CGTATCTCCG AAGAAACCCA GAACGCGTTA ACCGAGCTGT CACAGAACGC GGGCTACCCC ATCAGCGAGA CGCTGAGCGG CAGCGGTGAT TTAGGACAAG TACTGGTTGA TGCGATTAAG AAATACGACG CCGATCTGGT GCTGTGCGGC CACCATCAGG ACTTCTGGAG CAAACTGATG TCTTCGGCGC GCCAGCTGAT TAATACCGTG CATGTCGACA TGCTCATCGT GCCGCTGCGT GATGATGAAG ACGAATAA
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Protein sequence | MAYKHILIAV DLSPESKVLV EKAVSMARPY NAKVSLIHVD VNYSDLYTGL IDVNLGDMQQ RISEETQNAL TELSQNAGYP ISETLSGSGD LGQVLVDAIK KYDADLVLCG HHQDFWSKLM SSARQLINTV HVDMLIVPLR DDEDE
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