| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4195 |
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| Symbol | |
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| ID | 8135193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4734445 |
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| End bp | 4736994 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867512 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_003019745 |
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| Protein GI | 253690555 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATAA ACAATCATAA GGGTGGGTGC ATCGCGCATA AACCTACCTT GGCGGTAACG
CGGGCGGTGC AGTTAGCACT GTCTGGCGTA TTGATCTTGA GTGCCGGAAC GGTCAGTTCG
GCGCTGGCGG CGGAAATGAC GACAACTGTC GCGGCGCCGA CAGTGACGTT TTCTATCCCC
GCTGGGCCGC TAGGAACCAC GTTGCAGGCC GTTGCCAGCC GCGCCAATGT CATTCTCACG
TTTTCTCCCG ATCAAACACA GAATAAAACC AGCGGGAGTG TGCAGGGAAC CTACACCGTT
CAGGAAGCCT TTGCCGCCGC GCTGGCGGGA ACGGGGCTGA GTGCGGTACA GACGGCCACA
GGCTATCGGC TGGAATCCAT GCTTGCTGCT GAGGGAAGCG ACGGTAGCCT GATGATCCCG
ACGCTTTCGG TCGTTGGCGG TACATCGGAC AGCGCCGCCG CCGGACGTTC CGTGTTGCGT
CAGGCCGACG TTGACCGCGT GCAGGCCGAT AATATTGCCA GCCTGCTCGA TAAACTTCCC
GGCGTGTCGA TGGCGGGTTC TCCCCGTCCG GGGGGCCAGA GCCTGAACAT CTGGGGCATG
GGCGATATGG AAGACGTCAA AGTCGTGCTG GACGGCGCGC CAAAAGGCTT TGAGAAATAC
CGCCAGGGCT CGGTGTTTAT TGAACCTGAG CTGATTAAGC GTATCGATGT CGATAAAGGG
CCACATGATA TTCGCAGCGG CAACGGCGGC TTCGGCGGCA CCATTCATGT TGATACCAAA
GACGCCAGCG ATCTGCTGCT GCCGGGAGAA AACTTCGGCG GGATGGTCAA ATACAGCTAT
CACACTAACG ATCGACAAAA TATCTACAGC GGCGCGCTGT ATGGCCGAAC GGAAGACGGG
ATGGCTGACG GCCTGCTCTA CATGAGCAAG CGCGATGGCG ACAACATCGA ACGTCCTGAC
GGTACACGCT TTGTCTACTC GACCAGCGAC ATGGCGTCCT ACTTACTGAA GACCAACATC
TATCTGACGG ATGCTCAGAC GCTGACGCTC TCCGCGATGC GTTCTGAATC TGATGGTTGG
CAGCCGTTTG CCGCGAAGCG TGACGATATG GCGACGCCCA CACAAAGGGA AGTTGACCTC
TACGGCTGGG AAGAGGCCTG GCGACGTAAG CTGGTTTACC GCAATCAGGT AGATAAGAAC
TACTCGCTGA AATGGAATAT CGCGCCAGCG GATCAACCGT GGCTGAATCT GACGGCGTCA
TTTGCCACCT CAAAAACCGA ACAGCATGAC CGACGCCCTG ATTCGGCTTC ACAGAGTAGC
TATCTGGGAT CGCTGGGGAA TGAAAGCTGG GTGAGCTATA AAGATCAGTT GGCGGAGGTC
AGTAACGAAA GCCAGTTCAC CACCGGCCCG CTCGATCATA AGCTGCTGGT GGGGATGCGC
TGGCACCAGC ATAAGCGCGA TACGCTGATC TACTACCCAT CCGGTAAGAA TAACGCCGAG
TATAACTACG GCTATTTCCA GCCTTACTAT ATGCCGGCTG GGGAACAGGA AACCCGTAGC
CTGTATGTAC AGGATGCGGT GACGCTGGGT AGCGTGACGA TCACGCCGGG CGTTCGTTAT
GACCATGTGA CAAATACAGG GAAACCTAAC TTTGCACCGC GTTATAACAG CAGCATCCCG
GCTGCAGGGC ATGACTACAG CAGCGTGACC TACACCGGCT GGTCGCCGCG CATTGGTGCG
TTGTGGAAGG CGACGGACAA TCTGTCGCTG TTTGCCGATG TCAGCCGCAC CTGGCGCGCA
CCTGTTGTCG ATGAACAGTA TGAAGTGCAG TCTGCCGCGT CCAGCGTGCC GGGAACCAGC
CGTAATCTGC AGGTGGAAAG CATCAAAGCA TTTCGTCTGG GGGCGATACT CGATTTCAAC
AACCTGATGC TGGAAGAGGA CAGCCTGCAA ATCCGCACTA CGCTGTTCCG CAACCGCGGG
AAAAACGAAA TCTTCTACCG TCGCGGTATC TTGTGTGAGG CGCAGACCCA GAGTGGGACT
TCATCATCTT GCGGGCAGCC GCTCTCTAAC TACCGTAATC TGCCAGGCTA TACGATTGAA
GGGGTCGAAA TTGAATCCTT CTACGACAGC CGCTGGCTGT TTGGCAGCCT GTCTTTCTCC
TCGATTCGCG GCGAGCGCGA TGCGTCACCG CGTAACCCGT GGGGCAATAA AACCTGGATT
GCTGAAATTC CACCGACGAC CGCACACGCC ACGTTGGGCA CCAAAATTCC TCGTCTGGAC
ATGGCGGTAG GCTGGACGGG CGATTTTGTG CGCAAACAGG ATCGTTCACC TGCCGATGGC
GACCCGCTGG CTGATATCTG GGCGTTACCG AAGAGTAAGG GATATGTGCT GCATGGTCTG
TTCGCCAGTT GGCAGCCACA GGCGATAAAA GGATTTGAAG CCCGCGTGAC GGTTGATAAC
CTGCTGAATA CCGATTATTA CCCGTATCTG GGCGAATCGG TGTCCGGCGT GGGGCGTAAC
GTGAAAATCA GCGTGTTACA ACGCTTCTGA
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| Protein sequence | MAINNHKGGC IAHKPTLAVT RAVQLALSGV LILSAGTVSS ALAAEMTTTV AAPTVTFSIP
AGPLGTTLQA VASRANVILT FSPDQTQNKT SGSVQGTYTV QEAFAAALAG TGLSAVQTAT
GYRLESMLAA EGSDGSLMIP TLSVVGGTSD SAAAGRSVLR QADVDRVQAD NIASLLDKLP
GVSMAGSPRP GGQSLNIWGM GDMEDVKVVL DGAPKGFEKY RQGSVFIEPE LIKRIDVDKG
PHDIRSGNGG FGGTIHVDTK DASDLLLPGE NFGGMVKYSY HTNDRQNIYS GALYGRTEDG
MADGLLYMSK RDGDNIERPD GTRFVYSTSD MASYLLKTNI YLTDAQTLTL SAMRSESDGW
QPFAAKRDDM ATPTQREVDL YGWEEAWRRK LVYRNQVDKN YSLKWNIAPA DQPWLNLTAS
FATSKTEQHD RRPDSASQSS YLGSLGNESW VSYKDQLAEV SNESQFTTGP LDHKLLVGMR
WHQHKRDTLI YYPSGKNNAE YNYGYFQPYY MPAGEQETRS LYVQDAVTLG SVTITPGVRY
DHVTNTGKPN FAPRYNSSIP AAGHDYSSVT YTGWSPRIGA LWKATDNLSL FADVSRTWRA
PVVDEQYEVQ SAASSVPGTS RNLQVESIKA FRLGAILDFN NLMLEEDSLQ IRTTLFRNRG
KNEIFYRRGI LCEAQTQSGT SSSCGQPLSN YRNLPGYTIE GVEIESFYDS RWLFGSLSFS
SIRGERDASP RNPWGNKTWI AEIPPTTAHA TLGTKIPRLD MAVGWTGDFV RKQDRSPADG
DPLADIWALP KSKGYVLHGL FASWQPQAIK GFEARVTVDN LLNTDYYPYL GESVSGVGRN
VKISVLQRF
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