| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4177 |
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| Symbol | |
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| ID | 8135175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4715448 |
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| End bp | 4717133 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644867494 |
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| Product | ABC transporter related |
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| Protein accession | YP_003019727 |
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| Protein GI | 253690537 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGT CAGCCAGCTT ACAAACCAGT GCGGCGGTGC CCGTACTGGC TCTGGAAAAC
GTCACGATTG CCTACCGCAG TGACGATCGC GAGCAGACCG TCGTGGAAGG CGTCTCTTTT
CATATTCAGC CCGGTGAAGT CGTCGCACTG GTGGGGGAGT CCGGTTCAGG GAAAACCACC
ACCGCACAGG CGGTTATCGG TTTGCTGGCC GAGAACGGAC GGTTAACACG CGGTGCCATT
CGGCTCAACG GCGTGGATAT CAGCGACTGG TCGCAGAAGC GGTTGGACAG CGTGCGCGGT
GCGCAGATCA GCCTGATCCC GCAGGATCCC ACCAGTTCCC TGAATCCGGT GCAGACCATC
GGCGAGCAAG TGGACGAAAT TCTGCGTATT CATCAGCGGG AAGATCGCCA GACTATCCGC
CAGAAAACGC TGGCGCTGCT GGAACGCGTG GGGCTAAACC AGCCGGAGCT GCGAGCGAAA
CAGTATCCGC ACGAGCTGTC CGGCGGCATG AAACAGCGCG TCCTGATCGC GATTGCCATT
GCGCTAAAAC CTGCGCTGAT TATTGCTGAT GAGCCCACCA GCGCGCTGGA TGTCACCGTG
CAGAAACGTA TTCTCGATCT GCTTGATGAA CTGCGACGCG AAAATGGGAC GGCGGTGCTG
TTCGTTACGC ACGACCTTGG GGTCGCGGCC GAGCGTGCCG ATCGGCTGCT GGTCTTCCAG
AACGGCTACA TTCAGGAACA GGGGCCAACG CTTGAGGTGC TAAGCGCGCC CTCAAGCCAC
TATGCCCGCA CACTGCTGGC GAACGTGCCG TCGCTTAACC CAACGCCGCG TCCACCGCGC
AACCATGCAT CCGACATCAT TGTCTCGGTC GAAAATCTGG TACAGACCTT CCCCTTATCG
GGTCGTAAAG GGGAACATTT TCGGGCCGTG GATGACGTCT CTTTCAGCGT GGCACGCGGC
ACAACGCACG CCATTGTCGG CGAATCCGGC TCGGGTAAAA CCACCACAGC GCGCAGCCTG
CTCGGATTTC ATCACCCCAG CGCCGGGCGC ATTCTGATCG ACGGTACCGA TATCACTCAC
CTGAAAGGCG AAGCGCTACG GCAGTTCCGG CAGAAAATTC AGCTGGTCTA CCAAAATCCC
TTTGGTTCAC TCGATCCCTC ACAGCGGTTA TACGACATCG TCGAGGAACC GCTGCGCAAT
TTTAATCGCC ATACCGCCGC GCAGCGGGAG CAAAAAATTC ATGAGATGTT CGAGCGCGTC
GCCCTGCCCG CCGCGTTGCT GTCACGCAAG CCGCGTGAAC TGTCCGGCGG CCAGCGACAA
CGTGTCGCCA TCGCCCGGGC GCTGGTGCTG GAACCGCAGG TACTGGTGCT GGACGAGGCT
GTCTCGGCGC TGGATGTCAC CGTGCAGGCG CAGATTCTAC GTTTGCTGGC TGAATTGCAG
GAATCACTTG GGCTGACATA TCTGTTCATT TCGCACGATT TGGCGGTCGT GCGCCAGATC
GCCGACACCG TTTCCGTGCT GTACCACGGC AAGCAGCTTG AATCCGGCCC GGTAGAGCAG
ATCTTCGCCC ATCCCGAACA TCGCTACACC CGTGAACTCA TCGAGGCCAT TCCCGGGCAG
CAACACCCGG CTTTTGCCCG CCCGCATCAC TCTGAAACCA AAGTGGCACT AAACCAAGGA
CAGTAG
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| Protein sequence | MSLSASLQTS AAVPVLALEN VTIAYRSDDR EQTVVEGVSF HIQPGEVVAL VGESGSGKTT
TAQAVIGLLA ENGRLTRGAI RLNGVDISDW SQKRLDSVRG AQISLIPQDP TSSLNPVQTI
GEQVDEILRI HQREDRQTIR QKTLALLERV GLNQPELRAK QYPHELSGGM KQRVLIAIAI
ALKPALIIAD EPTSALDVTV QKRILDLLDE LRRENGTAVL FVTHDLGVAA ERADRLLVFQ
NGYIQEQGPT LEVLSAPSSH YARTLLANVP SLNPTPRPPR NHASDIIVSV ENLVQTFPLS
GRKGEHFRAV DDVSFSVARG TTHAIVGESG SGKTTTARSL LGFHHPSAGR ILIDGTDITH
LKGEALRQFR QKIQLVYQNP FGSLDPSQRL YDIVEEPLRN FNRHTAAQRE QKIHEMFERV
ALPAALLSRK PRELSGGQRQ RVAIARALVL EPQVLVLDEA VSALDVTVQA QILRLLAELQ
ESLGLTYLFI SHDLAVVRQI ADTVSVLYHG KQLESGPVEQ IFAHPEHRYT RELIEAIPGQ
QHPAFARPHH SETKVALNQG Q
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