| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4173 |
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| Symbol | |
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| ID | 8135171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4710717 |
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| End bp | 4711679 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867490 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_003019723 |
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| Protein GI | 253690533 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTA GCGTTATCCT GTATAAAAAA ATTGCTGACG ACCTACGCGC TCGTTTAGAT
CAACACTTCA CCGTCACTGA ACTTGACGCC TTTCCTTCAC TCGACCACCC GGCTCTGGCA
ACGGCCGAAG GCATCATTGG TTCCGGTGGT AAAGTCGATA AAGACTTCCT GCAACACGCC
CCACGCTTAC GTGCGGCCTC CACCATTTCT GTCGGTTACG ACACCTTTAA CGTCGACGCA
CTGAATGAAA AAGGGGTGAT TCTCATGCAT ACCCCAACCG TGCTGACAGA AACCGTGGCG
GATACGGTTC TGGCGCTGAT GCTCGCCAGC GCACGACGGG TCGTGGAAGT GGCCGAACGC
GTTAAAGCAG GCGAATGGAA AGGTGGCGTT GACAGCGACT GGTTTGGCAC TGACGTTCAC
CATAAGACCA TCGGCATTCT GGGGATGGGT CGCATCGGTC TGGCCGTCGC ACAACGCGCC
CACTTTGGTT TTAGCATGCC GGTTCTGTAC AACGCTCGCC GCCATCACGC CGAAGCAGAG
CAGCGCTTTA ATGCTCGCCA TTGCGATCTC GATACGCTCC TGGCCGAGTC TGATTTCCTC
TGTATCACGC TGCCACTCAC GACGGAAACG CATCATCTGA TTGGGCGTGA GCAGCTGGCA
AAAATGAAAC CCAGCGCCAT TTTGATTAAT ATCGGTCGTG GTGCTGTCGT GGATGAAGAC
GCGCTGACGG AAGCGCTGGT GAAAGGAACC ATTCAGGGCG CAGGCTTGGA CGTGTTTGTC
AAAGAACCGC TGCCCGTCGA TTCTCCGCTG CTGGATTTAC CTAACGTCGT GGCGCTGCCA
CATATCGGTT CTGCCACGCA CGAAACACGC TACGATATGG CCGCCTGTGC CGTTGATAAC
CTGATTGCCG CCCTAAGCGG TGAGGTGAAA GAAAACTGCG TGAATCCGCA GGTTTTGAAA
TAG
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| Protein sequence | MKPSVILYKK IADDLRARLD QHFTVTELDA FPSLDHPALA TAEGIIGSGG KVDKDFLQHA
PRLRAASTIS VGYDTFNVDA LNEKGVILMH TPTVLTETVA DTVLALMLAS ARRVVEVAER
VKAGEWKGGV DSDWFGTDVH HKTIGILGMG RIGLAVAQRA HFGFSMPVLY NARRHHAEAE
QRFNARHCDL DTLLAESDFL CITLPLTTET HHLIGREQLA KMKPSAILIN IGRGAVVDED
ALTEALVKGT IQGAGLDVFV KEPLPVDSPL LDLPNVVALP HIGSATHETR YDMAACAVDN
LIAALSGEVK ENCVNPQVLK
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