Gene PC1_4160 details

Gene Information

• Locus tag: PC1_4160
• ID: 8135158
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4694463
• End bp: 4695089
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644867477
• Product: superoxide dismutase
• Protein accession: YP_003019710
• Protein GI: 253690520
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0605] Superoxide dismutase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTATT CACTGCCATC GCTGCCTTAT GCTTATGACG CACTGGAACC GCATTTCGAC 
AAAGAGACGA TGGAAATTCA CCATTCCAAA CACCATCAGG CTTACGTCAA TAATGCTAAT 
GCCGCGCTGG AATCTCTGCC TGAGCTGGCT AAATTGTCTG TTGAAGAACT GATCGCCCAA 
CTGGATAAAG TCCCTGCTGA GAAAAAAGCA GCACTGCGTA ACAACGCAGG TGGCCATGCT 
AACCACAGCC TGTTCTGGAA AGGCCTGAAA GTAGGCACGA CGCTGACTGG CGACCTGAAA 
GCCGCCATCG AACGTGATTT CGGCAGCGTT GATGCATTTA AAGAGAAATT TGAGCAAGCA 
GCAGCAACCC GTTTTGGTTC TGGCTGGGCC TGGCTGGTGC TGAAAGACGA CGGCAAACTG 
GCTGTAGTCT CTACTGCAAA CCAAGACAGC CCGCTGATGG GTGAAGCAAT TTCTGGTACT 
TCTGGCTACC CAATCGTCGG TCTGGACGTA TGGGAACACG CTTACTACCT GAAATTCCAA 
AACCGTCGCC CAGATTACGC GAAAGCATTC TGGAACGTGG TGAACTGGGA CGAAGCAGCA 
GCTCGTTTCG CCAGCGCGAA AAAATAA 

 

Protein sequence

MSYSLPSLPY AYDALEPHFD KETMEIHHSK HHQAYVNNAN AALESLPELA KLSVEELIAQ 
LDKVPAEKKA ALRNNAGGHA NHSLFWKGLK VGTTLTGDLK AAIERDFGSV DAFKEKFEQA 
AATRFGSGWA WLVLKDDGKL AVVSTANQDS PLMGEAISGT SGYPIVGLDV WEHAYYLKFQ 
NRRPDYAKAF WNVVNWDEAA ARFASAKK