| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4153 |
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| Symbol | |
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| ID | 8135151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4684433 |
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| End bp | 4685974 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867470 |
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| Product | xylose transporter ATP-binding subunit |
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| Protein accession | YP_003019703 |
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| Protein GI | 253690513 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | [TIGR02633] D-xylose ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.419692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACATT TGTTGGAAAT GAAAAACATC ACCAAGGCGT TTGGCGCGGT GAAAGCCGTC
GATAATGTCA GCCTGACGCT GGAGGCGGGT CAGGTTTTGT CGCTGTGCGG CGAGAATGGT
TCGGGGAAAT CTACCTTGAT GAAGGTGCTG TGTGCCATCT ATCCGCATGG CAGCTATGAG
GGGCAGATCG TGTTTTCCGG TGACGAACTG CGCGCCAGCC ATATTCGCGA TACGGAGCAA
AAAGGCATTG CGATTATTCA TCAGGAACTG GCGCTGGTGA AAGAGATGAC GGTGCTGGAG
AACCTCTTTT TGGGTAACGA ATGGACGCGT TTTGGCGTAA TGGATTACGA CAATATGTAC
CTTCGCTGCC AGCGTATGTT GGAGCAGGTC AAGCTGGCCG TCGATCCGAA TACCAAAGTG
GGTGAGCTTG GATTAGGCCA GCAACAGCTG GTGGAAATTG CCAAGGCGCT GAACAAGCAG
GTGCGTCTGT TGGTGCTGGA TGAGCCCACT GCGTCATTGA CCGAACGTGA AACCGCAATC
CTGCTGGAGA TCATCCAGGA TCTGCGCGAT CACGGTATTG CCTGCATCTA TATCTCGCAC
AAGCTCAACG AAGTTAAAGC CATTTCCGAT GTGATTTGCG TGATTCGTGA TGGGAAACCT
ATTGGCACGC GCCCTGCGGT CGAGCTGAGC GAAGACCAGA TCATTGCCAT GATGGTGGGA
CGGGAACTGA CGGAGCTCTA TCCCAATGAA CCGCATACCA TTGGTGAAGA AGTGCTGCGT
GTAGAACACC TTACCGCCTG GCACCCAGTC AATCGCCACA TTCGCCGAGT GGATGATGTC
TCGTTTGCAC TGCATCGAGG TGAGATTCTC GGCATTGCCG GACTGGTGGG GTCAGGGCGT
ACGGAAACGG TGCAATGCCT GTTTGGTGCC TATCACGGTC GTTGGCAGGG CGACATCTTT
ATTGACGGCG AGCAGGTGAC CATCAGCAAT TGCCAGCAGG CGATGGCGCA GGGTATTGCG
ATGGTGCCGG AGGATCGTAA GAAAGATGGC ATTGTCCCGG TGATGAGCGT CGCGCAGAAC
ATGACGCTGG CGGCACTCGA TCAATTCACT GGGTCATTTT CCATGCTGGA CGATGCGCGT
GAACAGGACA TCATCCGGCA GTCGCTAGCG AATCTGAAGG TGAAAACCTC CAGCCCGGAA
CTGGCGATCG CCCGGCTTAG CGGCGGAAAC CAGCAAAAAG CGGTGCTGGC GAAATGTCTG
CTGTTGAAAC CCCGAATTCT GATTCTCGAT GAACCTACGC GCGGCATTGA TATCGGTGCC
AAGTATGAAA TCTACAAGCT CATTAATGCG CTGGTAAAAC AGCATATTGC CGTCATTGTC
ATCTCTTCTG AGCTGCCCGA AGTGCTGGGG CTGAGCGATC GGGTGTTGGT GATGCATCAG
GGGCGTATCA AAGCGGATTT GATCAATCGT GATTTAACCC AGGAACAGGT TATGGAAGCT
GCATTGAGGA GTGAACATCG TGCTGAAAAC ATCACAGTCT GA
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| Protein sequence | MPHLLEMKNI TKAFGAVKAV DNVSLTLEAG QVLSLCGENG SGKSTLMKVL CAIYPHGSYE
GQIVFSGDEL RASHIRDTEQ KGIAIIHQEL ALVKEMTVLE NLFLGNEWTR FGVMDYDNMY
LRCQRMLEQV KLAVDPNTKV GELGLGQQQL VEIAKALNKQ VRLLVLDEPT ASLTERETAI
LLEIIQDLRD HGIACIYISH KLNEVKAISD VICVIRDGKP IGTRPAVELS EDQIIAMMVG
RELTELYPNE PHTIGEEVLR VEHLTAWHPV NRHIRRVDDV SFALHRGEIL GIAGLVGSGR
TETVQCLFGA YHGRWQGDIF IDGEQVTISN CQQAMAQGIA MVPEDRKKDG IVPVMSVAQN
MTLAALDQFT GSFSMLDDAR EQDIIRQSLA NLKVKTSSPE LAIARLSGGN QQKAVLAKCL
LLKPRILILD EPTRGIDIGA KYEIYKLINA LVKQHIAVIV ISSELPEVLG LSDRVLVMHQ
GRIKADLINR DLTQEQVMEA ALRSEHRAEN ITV
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