| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4152 |
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| Symbol | |
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| ID | 8135150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4683274 |
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| End bp | 4684455 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867469 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003019702 |
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| Protein GI | 253690512 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGAAAA CATCACAGTC TGAACAACAA CATGTCGCTG GCTCTGTCTC GATGCTGCAA
CGGTTGAAAA GCATCAATCT TCAGGTCTAC GTGATGATTG CCGCCATCAT CGCCATCATG
CTCTTTTTCA CCTACATGAC CGACGGGGCA TATCTCAGTG CGCGTAACCT CTCCAACTTG
TTAAGGCAAA CGGCGATCAC CGGCATTCTG GCGGTCGGTA TGGTGTTTGT CATTATCTCC
GCAGAGATCG ATCTGTCGGT TGGTTCGATG ATGGGGCTAT TGGGCGGCGC GGCGGCGATT
TTTGATGTCT GGTTTGGCTG GCCTTTACCG TTGACCATCG TTGTGACACT TGCACTGGGA
TTGCTGCTTG GCGCGTGGAA TGGCTGGTGG GTCGCCTACC GGAAAGTCCC TTCTTTTATC
GTGACGCTGG CGGGGATGCT GGCTTTTCGC GGCATTCTGA TCGGCATTAC CAATGGGACG
ACGGTTTCCC CGACGAGTGA AGCGATGTCG CAGATTGGGC AGAGCTATCT GCCTTCCGGC
ATCGGTTTTA TGTTCGGTGC TATCGGGCTG ATGGTGTTTA TTGCCTGGCA GTGGCGTCGG
CGCAGCAGCC GTGCGCGATT AGGGTTACCG ATAAACCCAC CCGCGGGAGA TATTGGCCGC
CAAACGGTGA CGGCACTGGT GGTTCTGGGG GCGATTTATC TGCTGAATGA CTATCGCGGT
GTGCCAACGC CGGTTCTGGT ACTGACGCTG TTGATGCTGG GCGGTATTTT TCTGGCGACG
CGAACCGCAT TTGGCCGCCG CATTTATGCC GTGGGCGGAA ATATCGATGC TGCTCGCTTA
TCGGGTGTGA ATGTCGAGCG CACCAAAATG GCGGTGTTCG CGATTAATGG TCTGATGGTC
GCGGTCGCCG GGTTGATTCT CAGCTCGCGA TTGGGGGCGG GTTCGCCATC CGCCGGAAAC
ATTGCCGAGC TGGATGCGAT TGCCGCCTGC GTGATTGGTG GTACCAGCCT GGCGGGCGGT
ATCGGCAGCG TGGCGGGCGC GGTGATGGGG GCATTTATCA TGGCGTCGCT GGATAACGGA
ATGAGCATGC TGGATGTGCC GACCTTCTGG CAATACGTCG TAAAAGGTGG AATCCTGCTA
TTGGCGGTGT GGATGGATAC CGCAACAAAG CGGCGCGTAT GA
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| Protein sequence | MLKTSQSEQQ HVAGSVSMLQ RLKSINLQVY VMIAAIIAIM LFFTYMTDGA YLSARNLSNL
LRQTAITGIL AVGMVFVIIS AEIDLSVGSM MGLLGGAAAI FDVWFGWPLP LTIVVTLALG
LLLGAWNGWW VAYRKVPSFI VTLAGMLAFR GILIGITNGT TVSPTSEAMS QIGQSYLPSG
IGFMFGAIGL MVFIAWQWRR RSSRARLGLP INPPAGDIGR QTVTALVVLG AIYLLNDYRG
VPTPVLVLTL LMLGGIFLAT RTAFGRRIYA VGGNIDAARL SGVNVERTKM AVFAINGLMV
AVAGLILSSR LGAGSPSAGN IAELDAIAAC VIGGTSLAGG IGSVAGAVMG AFIMASLDNG
MSMLDVPTFW QYVVKGGILL LAVWMDTATK RRV
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