| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4141 |
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| Symbol | |
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| ID | 8135139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4670405 |
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| End bp | 4671433 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644867458 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003019691 |
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| Protein GI | 253690501 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTCT TCGTCACGGG TGCAACCAGC GGACTGGGGC GTAACGCGGT GGACTGGCTG
CTTCGTGCTG GGCATCAGGT GCTGGCGTGC GGGCGCGATC GCACGGTAGG CCAACAACTT
GAAGCTCAGG GCGCACAGTT TATCGGTATC GATTTGGTGG AAACCTCGGT AGACCTGTTT
CGATCGCTGA TGGCGGGCTG TGACGTGGTC TGGCACTGTG CCGCGAAATC ATCGCCGTGG
GGGCAATATC GCGATTTTTA TCAGAATAAT ACCGAGGTGA CGGCACGCCT GGCCGACGCC
GCTGGGCAGT TGGGTATCCC GCGTTTTGTG CATATCTCCA CGCCCGCGAT TTACTTCGAT
TACCAGCACC ACCTGAATAT TGATGAAAGC TACCGCGCGG CGCGTTTTGC CAATCACTAT
GCGCAGACCA AATTTCTGGC GGAAGAGCGA CTTCAGGCGC TGACGTCGCG CTACCCGCAA
ACCACCTACG TGATTCTGCG CCCGCGCGGT CTGTTTGGTC CGCATGATCG CGTGATTCTG
CCGCGAGTGC TGGAGCAGAT CGCGGTGGGC GGCGGTGTGC TGCGGCTTCC GCGCGGTGGT
GAGGCGCTGC TGGATCTCAC ATTTGTCGGC AACGTTGTGG AAGCGATGGT GCTTGCCAGT
GAGCGGGCGG GGTTAGTGTC TGGTTCGGTG TACAACATCA CCAATCATGA ACCCGCACGC
CTTGCCGATA TGCTGGAGCA ACTGCTGGCT GGGCAATTGG GGATGCATTA TCGCGTCAAA
GCGGTGCCGT ATCCGTTGTT GCACACGGTA GCGGGTGGTA TGGAGCTGCT CTCGTGCTTT
AGCCGGAAAG AGCCGCTGCT AACGCGCTAC AGTGCGGGAG CGGTGAATTT TGATATGACG
CTCAGCGCGG AGAAAGCCAA ACAGGAATTG GGGTATCAGC CTCGTTTCTC CCTTCAGCAG
GGCATTGAGC TGACCGGCGA CTGGTTCAGA GCGCATCTTG CACAGCGGAG CACGGACGGA
CATGGCTAA
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| Protein sequence | MRVFVTGATS GLGRNAVDWL LRAGHQVLAC GRDRTVGQQL EAQGAQFIGI DLVETSVDLF
RSLMAGCDVV WHCAAKSSPW GQYRDFYQNN TEVTARLADA AGQLGIPRFV HISTPAIYFD
YQHHLNIDES YRAARFANHY AQTKFLAEER LQALTSRYPQ TTYVILRPRG LFGPHDRVIL
PRVLEQIAVG GGVLRLPRGG EALLDLTFVG NVVEAMVLAS ERAGLVSGSV YNITNHEPAR
LADMLEQLLA GQLGMHYRVK AVPYPLLHTV AGGMELLSCF SRKEPLLTRY SAGAVNFDMT
LSAEKAKQEL GYQPRFSLQQ GIELTGDWFR AHLAQRSTDG HG
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