Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4134 |
Symbol | |
ID | 8135132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4663326 |
End bp | 4664255 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644867451 |
Product | hypothetical protein |
Protein accession | YP_003019684 |
Protein GI | 253690494 |
COG category | [S] Function unknown |
COG ID | [COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTATT TATCTCTGGC CGTTTCATCC CTGCTGTGTC TTTTCACCTC ATCTGTCTGG GCGATGGATT GCAGCAAGGC CAGTACAGAC AGCGAGAAAA TGATTTGCGC CAGCAGCCGC CTACAGCAGC TTGATGCGGT ATTGAACAAG GCCTATCAGG GTTACGTGAA ACAAGCAGAC AAAGCGCAGG CGCGTCAGGA GCAGCGCGCC TGGTTGGCCG AACGTGACCG CTGTCAGGAT GACGTTTGTC TGGGGAATGA GATGGTTTCC CGTATTCAGG CGCTGTCCGG TAGTGAAAAT ATCTCCCTGA TTACGCAGGC ATCAGACCAG TGGGACTTTG TGCTCAGTGT GGCGACGTGC GATATCGACT CTTCTTACTC AACTTGTGAA GGCCCCGGCA CGCTGGATAT CTTTAAGAAA GGACGCGGCG ACCTGTTCCA GCGTATCACG ATGGAAAATA TGTTCATCGA ACTGAACAAT AAAGGCGAAG TGACGGCGAA TCTGGTCGAG GTTTATGGTG AGAACAACAG TGGGCTGGTG ATTGATGACG CTAACTTCGA TCACCACGCG GATATTATGC TGCGCAATGG CAATAGCGGC GCTTACGGCG GGCCGTCTTA CGATGTGTTC CTGTTCGATG TGGAAAAGCA GCAGTTTACC CAGAATGCGC CGCTGACCGA ATTAGCCAGC TCCAACCTCG GCCTGTTCGA GATCGATGAA AAAAGTAAGA CCATCACCAC GTTTACCAAA AGCGGCTGCT GCTGGCACCA ATGGTCGACC TACCAGATCG CTAACAATAA CCCCGTCCTG ATTGCCGAAA CCACGCAAGC CTACTCTGAA GAGAAACAGG CGATGGTGGC CACCACTCGC GAACTGGTGG GCGGCACGTG GAAGGAGAAG GAAGAGATCG TTAAAACCGA CGAACCCTAA
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Protein sequence | MRYLSLAVSS LLCLFTSSVW AMDCSKASTD SEKMICASSR LQQLDAVLNK AYQGYVKQAD KAQARQEQRA WLAERDRCQD DVCLGNEMVS RIQALSGSEN ISLITQASDQ WDFVLSVATC DIDSSYSTCE GPGTLDIFKK GRGDLFQRIT MENMFIELNN KGEVTANLVE VYGENNSGLV IDDANFDHHA DIMLRNGNSG AYGGPSYDVF LFDVEKQQFT QNAPLTELAS SNLGLFEIDE KSKTITTFTK SGCCWHQWST YQIANNNPVL IAETTQAYSE EKQAMVATTR ELVGGTWKEK EEIVKTDEP
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