Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4131 |
Symbol | |
ID | 8135129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4659597 |
End bp | 4660097 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644867448 |
Product | hypothetical protein |
Protein accession | YP_003019681 |
Protein GI | 253690491 |
COG category | [S] Function unknown |
COG ID | [COG2320] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGGAC GGACAATTAT CGTAGTGGAT TACGATCCAC AGTGGGCGAC AAATTATGCA ACGGCGGCAA GGGAACTCAC GCAGGCGCTC GGCGAAGTTG CGGTAAATGT GCATCACATC GGCAGCACGG CCGTGCCGGG GCTATCCGCT AAGCCGGTGA TTGATATGCT GCTGGAAGTG GTTTCGTTAT CCGCTTTGGA CAGCTTCGAT CATGTCATGG TCGATCTGGG CTATCGTCCT CGTGGCGAAA ACGGAATAGC GGGACGTCGT TACTACACCA AAGGTGGCGA TGCGCGCACG CACCATCTTC ACGCTTTTGT TGTGGGTGAT GGGCATATTC AGCGGCACCT GGCTTTCCGG GATTATCTGC GGGCAAACCC AGCCGTATGT GCCGAGTACA CGGCAATAAA ACGCGCCGCT GCACTGGCGT GCGACGATGA TGCTGCCGTG TATAGCCAGT TAAAAAATGA CTTTATTGCC ACTCATGAGG CGCTCGCCTA G
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Protein sequence | MGGRTIIVVD YDPQWATNYA TAARELTQAL GEVAVNVHHI GSTAVPGLSA KPVIDMLLEV VSLSALDSFD HVMVDLGYRP RGENGIAGRR YYTKGGDART HHLHAFVVGD GHIQRHLAFR DYLRANPAVC AEYTAIKRAA ALACDDDAAV YSQLKNDFIA THEALA
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