Gene PC1_4121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4121 
Symbol 
ID8135119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4653773 
End bp4654090 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content48% 
IMG OID644867438 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003019671 
Protein GI253690481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00277725 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACTC GTCAGCAACA TCGTGATATT TTCAGTCAAC GTCTCAAGGA TGCCCGATTG 
TTAAGGGGGC TGTCTCAGAA AGGGCTGGGT ATTGCAGCCG GAATTGATGA GTTCGTAGCA 
AGCGCCCGAA TTAACCGTTA TGAGAAAGGC GTGCATGAAG CCAATCTCGT CACCGCCAGC 
CGTTTAGCTG AGGCACTGGA TGTTCCGCTC GCCTATTTCT ATGCCGCTGA TGATAATCTG 
GCAAGAATGA TTCTGATATT CGCAGAGCTA TCCGTAGCAG AGCAAGCGGT ACTACTTAAC 
TCGCTGGAAA ATAAATAA
 
Protein sequence
MNTRQQHRDI FSQRLKDARL LRGLSQKGLG IAAGIDEFVA SARINRYEKG VHEANLVTAS 
RLAEALDVPL AYFYAADDNL ARMILIFAEL SVAEQAVLLN SLENK