Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4114 |
Symbol | |
ID | 8135112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4648475 |
End bp | 4649422 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644867432 |
Product | peptidase T2 asparaginase 2 |
Protein accession | YP_003019665 |
Protein GI | 253690475 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1446] Asparaginase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.639895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAAC CCGTGATTGT GATCCACGGT GGCGCTGGTG CGCTGACCCG CTCGGCCATG AGCCCTGAAA AAGAACAGCG CTATCTGGCC GCGCTGTCCG AGATTGTCGC CAGCGGACAA CGCATTCTGG CCGAAAACGG CAGTGCGCTG GATGCCGTGA CGGAGGCCGT CCGTCTGCTG GAAGAGTGCC CGCTGTTCAA CGCCGGACAC GGCTCAGTCT TCACCCACGC GGAAACCCAC GAACTGGACG CCAGTATCAT GGACGGACGT TCGCTGGATG CTGGCGCAGT GAGCTGCGTC AGCCATATCC GTAACCCGAT TCTGGCAGCC CGCACCGTTC TCGAAGCGAG TCCGCACGTG ATGTTTACCG CTGACGGCGC GGAAGCATTT GCAGAACAGC ACGGTCTGGA AAGGGTTGAC CCTGCATTTT TCTCCACCGA CGAACGCCGC CAACAGTTGT ATAACGCGCA GGCAGGCGCA GGCCGCGTCA TTCTCGACCA TGACGGCCAG AGCGACCCTA TCGATCCCGA CCGTAAATTC GGTACCGTCG GCGCGGTCGC GCTCGATAGC GCAGGTAACC TCGCGGCAGC CACCTCAACG GGCGGCATGA CCAACAAACA GGCCGGACGC GTGGGCGACA GCCCGATTAT TGGCGCAGGC TGCTACGCCA ATAACCAGAC GGTCGCCGTT TCCTGTACCG GTACGGGCGA AGTCTTTATG CGTGCTGTCG CCGCTTATGA TGTCTCGGCG CTGATGGAAT ACGCCGGACT CACGCTACAG CAAGCCAGCG ATCGCGTCGT GATGGAGAAA CTGGTGCGGA TGGACGGCAG CGGTGGGCTG ATTGCCGTCG ACAAAGCGGG CAATATCGCC CTGCCGTTTA ACAGTGAAGG CATGTACCGC GGCTACGGCT ACGTGGGAGA AGCCCCCGTA GCCGATATCT ATCGTTAA
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Protein sequence | MTKPVIVIHG GAGALTRSAM SPEKEQRYLA ALSEIVASGQ RILAENGSAL DAVTEAVRLL EECPLFNAGH GSVFTHAETH ELDASIMDGR SLDAGAVSCV SHIRNPILAA RTVLEASPHV MFTADGAEAF AEQHGLERVD PAFFSTDERR QQLYNAQAGA GRVILDHDGQ SDPIDPDRKF GTVGAVALDS AGNLAAATST GGMTNKQAGR VGDSPIIGAG CYANNQTVAV SCTGTGEVFM RAVAAYDVSA LMEYAGLTLQ QASDRVVMEK LVRMDGSGGL IAVDKAGNIA LPFNSEGMYR GYGYVGEAPV ADIYR
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