| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4109 |
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| Symbol | |
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| ID | 8135107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4643094 |
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| End bp | 4644635 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867427 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003019660 |
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| Protein GI | 253690470 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.344383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCAT TTGTTCGCCG CTCTGCCGTT GCCCTCGGGC TCTCACTGTG TCTGGCGGCT
GTTGCCCAGG CGCAAGACCT TCGCATTTCT ATCTATGCCG ACATCACCGG GCTCGACCCG
CACGACACCT CGGACACGCT GAGCTACTCC ATTCAGAGCG GCATCTTCGA GCGTCTGTTC
CAGTTCGATA ATAAAATGAA GCTGGTACCG CGTCTGGCGA CGGGCTACAC CAGTAACGAT
AACGCCACCG AATTCGTCGT AACGCTGCGT GAAGGCATCA CCTTCCAGGA CGGCGCACCG
TTCAACGCCG ACGCCGTTAA AGCCAACCTC GACCGTCTGG CCGATCAGAG CAAAGGTCTG
AAGCGCAACA GCCTGTTTAA CATGGTGCAA ACCGTCACCG TGCTGTCGCC GACGCAGGTT
AAAATCGAGC TGAACAAATC CTTCGGTGCC TTTGTGAACA CGCTGGCGCA CCCGTCTGCC
GTCATGCACA GCCCGGAAGC CCTGAAGAAA TACCCGGACG AAGCACAGCT ACGCGTACAC
CCGGTCGGTA CCGGTCCATT CAAGTTCACC GAATGGCAGC AGGGTAAAGA CGTGAAGCTG
GTGAAATTCG ACAACTACTG GCAGAAAGGC TGGCCGAAAG TCGACAGCGT GACCTTCTAC
CCGACGCCGG AAGACTCCAC TCGTGTGGCG TCGCTGAAAT CCGGTCAGGT TGATGCCGTG
TATCCACTGC CTTCCGATCT GATCGCCACC GTACAAAGCG ACAGCAAGCT GGCGATTCAG
CGCGACCCGA GCATCTATCA ATTCTGGCTG GCGATGAACA ACCTGCGTCC GCCGTTGAAC
GATATCCGCG TGCGTCAGGC GCTTAATTAC GCCATCAACC GCGACATCTG GCTGAAAGTG
GGCTTTGCCG GTATGGGCGT TCCTGCCTCC TCGGCAATGG CGCCGGATGT GCAGTTCTTC
GCGCGTCAAA CCTCGCCGAA CTACACCTAT AACCCAGAGA AAGCTAAGGC GCTGCTGAAA
GAAGCGGGCT ATGCCAACGG CCTGAACCTG AAACTGTGGA CGACGAACCG CACCGACTAC
ATCCGCAGCG CGCAGTTCTT CAAACAACAG TTAGAGCAGG TTGGCGTCAA AGTTACCGTC
ACACCGATGG ATTCCGGGAT GCGTAATGCC AAACTGTTTG GCGTGAAAGA TCCGAAAGAT
GCCGAATTTG ACCTGTTCTA CAACGGCTGG TCTCCATCCA CCGGTGATGC CGACTGGGCG
CTGCGTCCGC TGTTCGCCAC CGAGTCTTGG GTGCCGGTCG CGTACAACGT CTCCTACTAC
AGCAACCCGG TAGCGGATAA AGCGATTACC GCCGGTCTGG CCACCGCCGA TGCTGACAAA
CGTGCCGCCG CTTACGCTGA CGCACAGCGC CAGATTTGGC AGGACGCGCC TGTGGTCTTC
CTGGGTACAC CGGACAACAT TGTCGGTAAA ACCAAGAACC TCGACGGCGT GTACATGCTG
GCAGACGGCT CGCTGATCTT CGATCAGGCT GAATTTAAGT AA
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| Protein sequence | MKPFVRRSAV ALGLSLCLAA VAQAQDLRIS IYADITGLDP HDTSDTLSYS IQSGIFERLF
QFDNKMKLVP RLATGYTSND NATEFVVTLR EGITFQDGAP FNADAVKANL DRLADQSKGL
KRNSLFNMVQ TVTVLSPTQV KIELNKSFGA FVNTLAHPSA VMHSPEALKK YPDEAQLRVH
PVGTGPFKFT EWQQGKDVKL VKFDNYWQKG WPKVDSVTFY PTPEDSTRVA SLKSGQVDAV
YPLPSDLIAT VQSDSKLAIQ RDPSIYQFWL AMNNLRPPLN DIRVRQALNY AINRDIWLKV
GFAGMGVPAS SAMAPDVQFF ARQTSPNYTY NPEKAKALLK EAGYANGLNL KLWTTNRTDY
IRSAQFFKQQ LEQVGVKVTV TPMDSGMRNA KLFGVKDPKD AEFDLFYNGW SPSTGDADWA
LRPLFATESW VPVAYNVSYY SNPVADKAIT AGLATADADK RAAAYADAQR QIWQDAPVVF
LGTPDNIVGK TKNLDGVYML ADGSLIFDQA EFK
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