Gene PC1_4103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4103 
SymbolslmA 
ID8135101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4637463 
End bp4638059 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content53% 
IMG OID644867421 
Productnucleoid occlusion protein 
Protein accessionYP_003019654 
Protein GI253690464 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0313607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA AAGAAAGTAC GAAAAGGAAC CGCCGCGAGG AAATTTTGCA GGCGCTGGCG 
CAAATGCTGG AATCCAGCGA CGGCAGCCAA CGCATCACCA CGGCAAAACT GGCGGCGAAC 
GTCGGCGTGT CCGAGGCGGC GCTCTACCGG CATTTCCCCA GTAAAACGCG GATGTTTGAT 
AGCCTGATTG AATTTATTGA GGATAGCCTG ACCACCCGCA TTAACCTGAT TCTGCAAGAC 
GAAAAAGAAA CGTTTAATCG TCTTCGTCTG ATTTTGCTGC TGATTTTAGG GTTTGCGGAA 
CGCAATCCTG GTCTGACTCG CATCATGACC GGTCACGCGC TGATGTTTGA ACAGGATCGC 
TTACAGGATC GCATCAACCA GCTGTTTGAG CGCATTGAAT CACAGCTGCG TCAGGTGCTA 
CGCGAGCATA AGCTACGTGA TGGTAAAGGC TTCCAGCATG ACGAAACGCT GCTGGCTAGC 
CAGCTGTTAG CGTTTTGCGA AGGGATGCTG TCGCGCTTCA TTCGCTCTGA ATTCCGCTAT 
CGCCCAACGC AAGAATTCGA CACCCGCTGG CCGCTGCTGG CCGCACAGCT GAACTAA
 
Protein sequence
MAEKESTKRN RREEILQALA QMLESSDGSQ RITTAKLAAN VGVSEAALYR HFPSKTRMFD 
SLIEFIEDSL TTRINLILQD EKETFNRLRL ILLLILGFAE RNPGLTRIMT GHALMFEQDR 
LQDRINQLFE RIESQLRQVL REHKLRDGKG FQHDETLLAS QLLAFCEGML SRFIRSEFRY 
RPTQEFDTRW PLLAAQLN