Gene PC1_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4100 
SymbolradC 
ID8135098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4634816 
End bp4635481 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content51% 
IMG OID644867418 
ProductDNA repair protein RadC 
Protein accessionYP_003019651 
Protein GI253690461 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0607652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTGGG AAAAGGGATT GGCACCGCGT GAAAAGCTGG TGCGTTTAGG GGCTGAATCG 
CTGACGGATG TCGAATTGCT GGCGATTTTT TTACGCACTG GGCTGCCGGG CGTACATGTG 
ATGCAGCTGG CAGAGGATTT GCTGGTGCAG TTCGGATCGT TATATCAACT GATGACGGCC 
GATCAGTCCG CATTTCGTAC CGCCAAAGGG GTGGGAATAT CAAAATATAC GCAAATCAAG 
GCGATCGCGG AGCTATCGCG TCGGCTATTT TTCTCTCGTC TGGCGAAAGA GGATGCGATG 
CTGAATCCCC AGGCGACAGG TCAATATCTG CAATTATTGC TGTCCCGGCG TGAGCGTGAG 
GTTTTTTTAG TTCTGTTTTT GGACAATCAG CATCACGTTA TTCGCCATCA GGAGATGTTT 
GTTGGTACGA TTAACAGCGT GGAAGTACAC CCGCGTGAGA TTGTACGTGA AGCGCTAAAG 
GCTAATGCCG CCGCGCTGAT TCTGGCGCAT AATCATCCGT CGGGAAAAGC GGAGCCGAGT 
CAGGCTGACC GTGCGATAAC CGAACAGATT GTTAAAGCCT GTCTGTTAAT GGAGATCCGC 
GTGCTCGATC ATTTGGTGAT TGGACATGGC GAATATGTTT CTTTTGCCGA GCGCGGCTGG 
ATTTAA
 
Protein sequence
MGWEKGLAPR EKLVRLGAES LTDVELLAIF LRTGLPGVHV MQLAEDLLVQ FGSLYQLMTA 
DQSAFRTAKG VGISKYTQIK AIAELSRRLF FSRLAKEDAM LNPQATGQYL QLLLSRRERE 
VFLVLFLDNQ HHVIRHQEMF VGTINSVEVH PREIVREALK ANAAALILAH NHPSGKAEPS 
QADRAITEQI VKACLLMEIR VLDHLVIGHG EYVSFAERGW I