| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4090 |
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| Symbol | |
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| ID | 8135088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4625911 |
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| End bp | 4626873 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867408 |
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| Product | ADP-heptose:LPS heptosyl transferase I |
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| Protein accession | YP_003019641 |
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| Protein GI | 253690451 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAGTGC TGATCGTGAA AACATCGTCG ATGGGTGATG TGCTGCATAC GTTACCGGCC
TTGACCGATG CGATGCAGGT TATACCCGGT ATTCAGTTCG ACTGGGTGGT TGAAGAAGGT
TTCGCGCAGA TCCCCAGTTG GCACCCGGCG GTTTCCCGCG TAATTCCGGT GGCGATACGC
CGCTGGCGCA AAAGCTGGTT CAGCGCCCCG ACACGTCAGG AGCGTGCAGA ATTTAAACGC
CAGCTACGCC AGCACCGCTA TGATGCCGTC ATTGACGCAC AAGGGCTGAT TAAAAGCGCG
CTGCTGGTAA CGCGACTCGC CAATGGAAAG AAACACGGAT TGGATTGCAA GAGCGCACGT
GAGCCGCTGG CAAGCTGGTT TTATAACTAT CGCCACCCGA TCAGCCGTCA ACAGCATGCC
GTTGAGCGCG TACGCGAGCT GTTTGCCGCC AGCTTGGGCT ATCGGAAACC GGCCGAGCGC
GGCGATTATG CCATTGCCTC GCGCTTCCTC TCCCAGCCGC CCGCAGACGC CAACCGCTAT
CTGGTGTTTC TCCACGCTAC AACGCGCGAT GAAAAACACT GGCCGGAAGC GCACTGGCGC
GAGTTGATTG CCCTATTAGC ACCAAGCGGA CTACGCATCA AACTGCCTTG GGGAGCGGAG
CATGAGCACC AGCGCGCATT ACGGCTGGTG GAAGGGTTCC CGCACGTTGA GGTCTTACCG
CGCCTCACGC TGCAACAGGT CGCCGAGGTA TTAGCAGGTG CCAGAGCCGT CGTTTCCGTC
GATACCGGGC TTAGCCACCT GACGGCAGCG CTGGATCGTC CAAATATCAC CTTATATGGG
CCAACCGACC CGGGTCTGAT TGGCGGCTAC GGAATGAATC AGGTGGTGGA AATGTCTGGT
GACAATTCCA TGGATACAAT TTCACCTCAA GCAATCTTTC AACAATTACA ATCTCTTATA
TAA
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| Protein sequence | MRVLIVKTSS MGDVLHTLPA LTDAMQVIPG IQFDWVVEEG FAQIPSWHPA VSRVIPVAIR
RWRKSWFSAP TRQERAEFKR QLRQHRYDAV IDAQGLIKSA LLVTRLANGK KHGLDCKSAR
EPLASWFYNY RHPISRQQHA VERVRELFAA SLGYRKPAER GDYAIASRFL SQPPADANRY
LVFLHATTRD EKHWPEAHWR ELIALLAPSG LRIKLPWGAE HEHQRALRLV EGFPHVEVLP
RLTLQQVAEV LAGARAVVSV DTGLSHLTAA LDRPNITLYG PTDPGLIGGY GMNQVVEMSG
DNSMDTISPQ AIFQQLQSLI
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