| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4086 |
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| Symbol | tdh |
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| ID | 8135084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4621428 |
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| End bp | 4622459 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867404 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_003019637 |
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| Protein GI | 253690447 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAT TGGCAAAATT GCGGCCGGAA GAGGGCATCT GGATGGTGGA CTCCCCCACG
CCGGAGCTCG GGCATAACGA CATCATGATT AAAATTCGCA AAAGCGCGAT TTGCGGAACG
GATGTGCATA TCTATAACTG GGACGAATGG TCGCAGAAGA CCATTCCCGT TCCGATGGTT
GTCGGGCATG AATACGTGGG AGAAATTGTC GCTATCGGTC AGGAGGTTAA CGGTTTTCAT
ATTGGCGATC GGGTCTCTGG CGAAGGACAT ATTACCTGCG GTTACTGCCG TAACTGCCGC
GCCGGCCGAC GCCATTTATG CCGCAATGCT ATCGGCGTCG GGGTAAATCG CCCCGGTTCA
TTCGCGGAGT ATCTGGTGAT TCCTGCCTAC AACGCGTTTC GTATCCCTGA CAATATTTCT
GACGAGCTAG CCGCCATTTT CGATCCTTTC GGTAACGCGG TGCACACTGC GCTTTCTTTT
GATTTAGTGG GTGAGGATGT CTTGATTGCT GGCGCAGGGC CGATAGGCAT GATGGCGGCG
GCGGTATGTC GTCACGTTGG CGCAAGAAAC GTCGTGATTA CCGATGTGAA TGCGTACCGT
CTGGATCTTG CCAGGAAAAT GGGGGCAACG CGTGCCGTCA ATGTGGCAGA GGAGAGGCTG
GCTGACGTCA TGATAGAACT GGGCATGACC GAAGGGTTTG ATATTGGGTT AGAGATGTCG
GGTGCGCCAT CGGCTTTTCG CGCCATGCTG AAAGCGATGA ACCACGGTGG GCGCATCGCT
ATGCTGGGTA TTCCGCACGA ACCGATGTCG ATTGACTGGG GAGAGGTGAT TTTTAAGGGG
CTGTTTATCA AAGGTATCTA CGGACGGGAA ATGTTCGAAA CCTGGTACAA AATGTCGGCG
CTGATTCAGT CTGGGCTGGA TTTGTCACCG ATTATCACCC ACCGCTTTCA CATTGATGAG
TTCCAAAAAG GCTTTGATGC CATGCGCTCG GGTCAATCGG GCAAGGTTAT TCTCAATTGG
GACGAGAGAT AA
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| Protein sequence | MKALAKLRPE EGIWMVDSPT PELGHNDIMI KIRKSAICGT DVHIYNWDEW SQKTIPVPMV
VGHEYVGEIV AIGQEVNGFH IGDRVSGEGH ITCGYCRNCR AGRRHLCRNA IGVGVNRPGS
FAEYLVIPAY NAFRIPDNIS DELAAIFDPF GNAVHTALSF DLVGEDVLIA GAGPIGMMAA
AVCRHVGARN VVITDVNAYR LDLARKMGAT RAVNVAEERL ADVMIELGMT EGFDIGLEMS
GAPSAFRAML KAMNHGGRIA MLGIPHEPMS IDWGEVIFKG LFIKGIYGRE MFETWYKMSA
LIQSGLDLSP IITHRFHIDE FQKGFDAMRS GQSGKVILNW DER
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