| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4080 |
|---|
| Symbol | cysE |
|---|
| ID | 8135078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 4615666 |
|---|
| End bp | 4616487 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644867398 |
|---|
| Product | serine acetyltransferase |
|---|
| Protein accession | YP_003019631 |
|---|
| Protein GI | 253690441 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1045] Serine acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01172] serine O-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.135074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAG AAGAACTGGA ACTGGTCTGG ACCAATATCA AGGCAGAAGC GCGCAGTCTC
GCAGATTGTG AACCGATGCT GGCCAGCTTT TTTCATGCCA CATTGCTGAA ACACGAGAAT
CTGGGGAGCG CGCTGAGCTA CATGCTGGCG AATAAGTTAG CCAATTCGAT TATGCCTGCG
ATTGCTATTC GTGAGGTGGT CGAAGAAGCC TATAGCGCCG ATCCACAGAT GATCGTTTCT
GCCGCGCGCG ATATTCAGGC GGTCTGCCTG CGCGATCCGG CGGTAGATAA ATACTCGACG
CCGCTACTCT ACCTGAAAGG GTTTCATGCA TTACAGGCGT ATCGTATTGG TCACTGGCTT
TGGTCGCAGG ATCGTCAAGC GCTGGCGGTC TATTTCCAGA ACCAGATCTC GGTCTCTTTT
GGTGTCGATA TTCACCCAGC GGCGAGAATC GGCTGCGGGA TCATGCTCGA TCACGCAACC
GGTATTGTGA TCGGCGAAAC CGCCGTCGTT GAAAATGATG TCTCCATTCT GCAGTCCGTG
ACGCTGGGCG GTACGGGCAA AACCAGTGGC GATCGTCACC CTAAAATTCG TGAAGGCGTA
ATGATTGGCG CAGGCGCGAA AATTCTGGGG AACATTGAAG TCGGCTGTGG TGCGAAAATT
GGCGCCGGTT CTGTCGTGCT GCAATCCGTT CCTCCACACA CGACGGCGGC AGGTGTGCCA
GCTCGTATCG TCGGTCGCCC GGAAAGCGAT AAACCCGCTA TGGATATGGA TCAGTATTTC
AACGGCATCA ATCGCGGTTT TGAATACGGT GATGGTATCT AA
|
|---|
| Protein sequence | MSTEELELVW TNIKAEARSL ADCEPMLASF FHATLLKHEN LGSALSYMLA NKLANSIMPA
IAIREVVEEA YSADPQMIVS AARDIQAVCL RDPAVDKYST PLLYLKGFHA LQAYRIGHWL
WSQDRQALAV YFQNQISVSF GVDIHPAARI GCGIMLDHAT GIVIGETAVV ENDVSILQSV
TLGGTGKTSG DRHPKIREGV MIGAGAKILG NIEVGCGAKI GAGSVVLQSV PPHTTAAGVP
ARIVGRPESD KPAMDMDQYF NGINRGFEYG DGI
|
|---|
| |