Gene PC1_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4079 
SymbolpagP 
ID8135077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4614718 
End bp4615356 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID644867397 
Productpalmitoyl transferase 
Protein accessionYP_003019630 
Protein GI253690440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0189022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTTGA AGCGAACTTT AATCACGTTG AGTTTGATTA CACTACCCAT TGTTCCTTTT 
TTGAGCTACG CAGCAGAAAG CATAAATAAT ACGAGCAGCA CCGAAAATCT TGCCCCTGTC 
ACGGTTGATT CCAGTGATCC GGTATCGGAT AAGCAGGGGG AAAGCTGGTG GCAGAGAAGT 
AAAAATAACC TGTCCACGAC CTGGAACGCG CCGCAGAGCC ACGATATTTA TATCCCGGCG 
ATTACCTGGC ATAACCGCTG GACGTACGAT AAAGAAAAGA CTGATAGATA TAATGAAAGG 
CCGTGGGGCG CGGGTTACGG TGTTTCCCGT TTGGATAAGG ATGGGGATTG GCACGGGCTT 
TATATCATGG CTTTTAAAGA TTCCTTTAAT AAATGGGAAC CTATCGGTGG CTATGGTTAT 
GAAAAGCGTT GGCGACCAAC CAGCGATCAG GATTTTCAAC TGGGTCTGGG TTTTACGGCT 
GGCGTAACGA TGCGTGATAA CTGGAACTAT ATCCCCATTC CGGTTTTGTT GCCTTTGGCA 
TCAATAAGCT ATAGCAAGCT CTCTTTCCAG GCGACTTACA TTCCCGGTAC ATACAATAAC 
GGTAATGTTT TCTTTGCATG GTTAAGATGG CAGATTTAG
 
Protein sequence
MYLKRTLITL SLITLPIVPF LSYAAESINN TSSTENLAPV TVDSSDPVSD KQGESWWQRS 
KNNLSTTWNA PQSHDIYIPA ITWHNRWTYD KEKTDRYNER PWGAGYGVSR LDKDGDWHGL 
YIMAFKDSFN KWEPIGGYGY EKRWRPTSDQ DFQLGLGFTA GVTMRDNWNY IPIPVLLPLA 
SISYSKLSFQ ATYIPGTYNN GNVFFAWLRW QI