Gene PC1_4074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4074 
Symbol 
ID8135072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4610881 
End bp4611816 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content58% 
IMG OID644867392 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003019625 
Protein GI253690435 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.741319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAT TCAAACACCT GCGAACGCTG CAAGCACTGC GCAATACCGG ATCGTTAGCC 
GCCGCTGCCG CTGCGCTTCA CCAAACTCAA TCGGCGTTAT CCCACCAGTT CAGCGATCTG
GAACAACGCC TTGGGTTCAG GCTATTCGTA CGCAAAAGCC AGCCGCTGCG CTTTACGCCT
CAGGGAGACA TTCTGTTGCA GTTGGCAGAG CAGGTGTTAC CACAGATCCA GCAGGCGTTG
CAGGCCTGCC ATGAGCCGCA CCAAACCACG CTGCGTCTGG CTATTGAGTG CCATAGCTGT
ATTCAGTGGC TGACGCCTGC GCTAGACGAG TTCCATCAGC ATTGGCCGCA GGTAGCGATG
GACTTTAAAT CAGGCGTGAC GTTCGACCCT CAGCCAGCGC TCCAGCAAGG CGAGCTGGAT
CTGGTCATGA CCTCCGACAT CATGCCGCGC AGCGGCCTGC ACTATTCGCC TCTGTTTGAT
TTTGAAGTCA GACTGGCGCT GGCTCCCGAG CATCCACTAG CCCAGAAAGA GAAAATCGAA
CCGGAGGATT TCACCGCCGA AACCCTGATG ATCTATCCGG TACAGCGGCA GCGGCTGGAC
GTCTGGCGTC ACTTTTTGCA GCCGGCAGGC GTCAGCCCGG CACTGAAAAG CGTGGATAAT
ACGCTGCTGC TGATTCAGAT GGTTGCTGCC CGCATGGGCA TCGCCGCACT ACCGCATTGG
GTGGTGGAAA GTTTCGAGTG TCAGGGGTTG ATTGTCACCA AATCGCTGGG TGATGGACTG
TGGAGCCGGT TGTACGCCGC CGTCCGCGAC GGAGAGCAGC GCCAACCGGT GATTGATGCG
TTTATTCGTT CGGCGCGTCA GCACGCTTGT GAGCATTTAC CGTTTGTGAA GGACGCTTCA
CGACCCAACG CTGGTGTACC CACAGCGAGG ACGTGA
 
Protein sequence
MIEFKHLRTL QALRNTGSLA AAAAALHQTQ SALSHQFSDL EQRLGFRLFV RKSQPLRFTP 
QGDILLQLAE QVLPQIQQAL QACHEPHQTT LRLAIECHSC IQWLTPALDE FHQHWPQVAM
DFKSGVTFDP QPALQQGELD LVMTSDIMPR SGLHYSPLFD FEVRLALAPE HPLAQKEKIE
PEDFTAETLM IYPVQRQRLD VWRHFLQPAG VSPALKSVDN TLLLIQMVAA RMGIAALPHW
VVESFECQGL IVTKSLGDGL WSRLYAAVRD GEQRQPVIDA FIRSARQHAC EHLPFVKDAS
RPNAGVPTAR T