Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4074 |
Symbol | |
ID | 8135072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4610881 |
End bp | 4611816 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644867392 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003019625 |
Protein GI | 253690435 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.741319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGAAT TCAAACACCT GCGAACGCTG CAAGCACTGC GCAATACCGG ATCGTTAGCC GCCGCTGCCG CTGCGCTTCA CCAAACTCAA TCGGCGTTAT CCCACCAGTT CAGCGATCTG GAACAACGCC TTGGGTTCAG GCTATTCGTA CGCAAAAGCC AGCCGCTGCG CTTTACGCCT CAGGGAGACA TTCTGTTGCA GTTGGCAGAG CAGGTGTTAC CACAGATCCA GCAGGCGTTG CAGGCCTGCC ATGAGCCGCA CCAAACCACG CTGCGTCTGG CTATTGAGTG CCATAGCTGT ATTCAGTGGC TGACGCCTGC GCTAGACGAG TTCCATCAGC ATTGGCCGCA GGTAGCGATG GACTTTAAAT CAGGCGTGAC GTTCGACCCT CAGCCAGCGC TCCAGCAAGG CGAGCTGGAT CTGGTCATGA CCTCCGACAT CATGCCGCGC AGCGGCCTGC ACTATTCGCC TCTGTTTGAT TTTGAAGTCA GACTGGCGCT GGCTCCCGAG CATCCACTAG CCCAGAAAGA GAAAATCGAA CCGGAGGATT TCACCGCCGA AACCCTGATG ATCTATCCGG TACAGCGGCA GCGGCTGGAC GTCTGGCGTC ACTTTTTGCA GCCGGCAGGC GTCAGCCCGG CACTGAAAAG CGTGGATAAT ACGCTGCTGC TGATTCAGAT GGTTGCTGCC CGCATGGGCA TCGCCGCACT ACCGCATTGG GTGGTGGAAA GTTTCGAGTG TCAGGGGTTG ATTGTCACCA AATCGCTGGG TGATGGACTG TGGAGCCGGT TGTACGCCGC CGTCCGCGAC GGAGAGCAGC GCCAACCGGT GATTGATGCG TTTATTCGTT CGGCGCGTCA GCACGCTTGT GAGCATTTAC CGTTTGTGAA GGACGCTTCA CGACCCAACG CTGGTGTACC CACAGCGAGG ACGTGA
|
Protein sequence | MIEFKHLRTL QALRNTGSLA AAAAALHQTQ SALSHQFSDL EQRLGFRLFV RKSQPLRFTP QGDILLQLAE QVLPQIQQAL QACHEPHQTT LRLAIECHSC IQWLTPALDE FHQHWPQVAM DFKSGVTFDP QPALQQGELD LVMTSDIMPR SGLHYSPLFD FEVRLALAPE HPLAQKEKIE PEDFTAETLM IYPVQRQRLD VWRHFLQPAG VSPALKSVDN TLLLIQMVAA RMGIAALPHW VVESFECQGL IVTKSLGDGL WSRLYAAVRD GEQRQPVIDA FIRSARQHAC EHLPFVKDAS RPNAGVPTAR T
|
| |