| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4073 |
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| Symbol | |
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| ID | 8135071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4608506 |
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| End bp | 4610776 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644867391 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_003019624 |
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| Protein GI | 253690434 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATTG TGAATCACAC ACTGGGTTTT CCGCGCGTTG GATTACGCCG TGAACTGAAA
AAAGCGCAGG AAAGCTACTG GGCAGGTAAC GCGACACAGG AAGAGTTGCT GACCGTTGGA
CGCGAGCTGC GTGCGCGTCA TTGGCAACAA CAGAAGGATG CTGGCGTTGA TCTGCTGCCA
GTGGGTGATT TCGCCTGGTA CGACCATGTA CTGACCACCA GTCTGCTGCT GGGTAACGTA
CCTGCTCGTC ATCAGAATGA AGACGGCTCG GTCGATCTGG ATACGCTGTT CCGTATTGGT
CGTGGACGTG CGCCAACGGG TCAGCCCGCT GCGGCGGCGG AAATGACCAA GTGGTTTAAC
ACTAACTATC ACTACATGGT GCCGGAGTTT ACCAAAGGGC AGCAGTTTAA GCTGACCTGG
ACACAACTGC TGGATGAAGT TGATGAAGCA CTGGCGCTGG GCCATAAAGT GAAGCCCGTT
CTGTTAGGCC CGGTTACCTA CCTGTGGCTG GGTAAAGTGA AAGGTGAGCA GTTTGACCGT
CTGTCGCTGC TGCAGGATAT TCTGCCGGTT TATCAGCAGG TGCTGGCTGA GCTGGCGAAA
CGCGGTATTG AGTGGGTGCA GATCGATGAG CCTGCATTGG TGCTGGAATT GCCGCAAGCG
TGGCTGGCCG CGTTTAAACC GGCCTACGAT GCACTACAGG GGCAGGTGAA ACTGCTGCTG
ACGACTTATT TTGATAGCGT TAGCCAGAAT CTGGAAACGA TTAAGGTGCT GCCGGTTCAG
GGACTGCATG TCGATCTGGT TCACGGTAAG GATGATGCCG CTACGCTGAG CACCCAACTG
CCTGCTAACT GGGTACTGTC TCTGGGGGCG ATTAACGGCC GTAACGTTTG GCGAGCCGAT
CTAAGTAGCT GGTTCGAGCG TCTGCAACCG CTGGTGGGGA CGCGCGATCT GTGGCTGGGC
AGCTCCTGCT CGCTGCTGCA TAGCCCTATC GATCTGAGTG TGGAAGTGCG TCTGGATGAT
GAAGTGAAGA GCTGGTTTGC CTTTGCGATT CAGAAATGTG CGGAGCTGTC ACTGTTGTCT
CAGGCGCTGA ACAGCGGCAA CGGTCAGGCT CTGGAAGCCT ACAGCGCGCC GATTCGCGCC
CGCCGTACCT CGACGCGTGT GAATAACGCC GCCGTTGCGC AGCGTTTGGC AGCGATTACC
GCCCAAGACA GCCAGCGTCA GAACGTGTAT TCGGTGCGTG CAGAGGCTCA GCGTGAGCGC
TTTAATCTGC CGGCATGGCC GACGACCACG ATCGGTTCTT TCCCGCAAAC CACTGAAATT
CGCGGTCTGC GTCTGGATTT CAAGCAGGGC CGTCTGGATA GCAATAACTA TCGTACCGGT
ATTGCCGAGC ACATTAAGCA AGCGGTGATT GAACAAGAGC GTCTGGGTCT GGACGTACTG
GTGCACGGTG AAGCTGAACG TAACGACATG GTGGAGTACT TCGGTGAGCA TCTGGATGGG
TTTATCTTTA CCCAGAACGG CTGGGTGCAG AGCTACGGTT CGCGCTGTGT GAAGCCGCCA
GTCATCATTG GTGATGTAAG CCGTCCAGAA GCGATCACCG TTGAGTGGGC GAAATACGCA
CAGTCCCTGA CTGACAAGCC GATGAAAGGC ATGCTGACAG GCCCGGTGAC CATTTTGTGC
TGGTCGTTCC CGCGCGAAGA CGTCACGCGT GAAACCATCG CTAAGCAGAT TGCTCTGGCG
CTGCGGGATG AAGTCGCGGA TTTGGAAGCC GCAGGTATTG GCATCATCCA GATTGACGAG
CCGGCACTGC GTGAAGGTCT GCCGCTGCAC CGCTCTGACT GGGACGCGTA TCTGGCCTGG
GCTGTGGATG CTTTCCGCCT GAATGCCGCC GTGGCGAAAG ATGATACGCA GATCCATACC
CATATGTGTT ACTGCGAGTT CAACGACATC ATGGATTCTA TCGCCGCGCT GGATGCTGAC
GTGATTACGA TTGAAACCTC CCGTTCCGAC ATGGAATTGC TGGAGTCGTT TGAAGAATTC
GAATACCCGA ATGAAATCGG CCCTGGCGTT TATGATATCC ACTCCCCGAA CGTACCAAGC
GTGGAATGGA TGGAAGCCCT GCTGAAGAAA GCGGCGCAGC GTATTCCCGC TGAACGCCTG
TGGGTGAACC CAGATTGCGG TCTGAAAACT CGCGGCTGGC CGGAAACGCG TCAGGCTCTG
GCGAATATGG TTCAGGCAGC ACAGCGTTTG CGTGAATTCA GTAATGTTTA A
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| Protein sequence | MAIVNHTLGF PRVGLRRELK KAQESYWAGN ATQEELLTVG RELRARHWQQ QKDAGVDLLP
VGDFAWYDHV LTTSLLLGNV PARHQNEDGS VDLDTLFRIG RGRAPTGQPA AAAEMTKWFN
TNYHYMVPEF TKGQQFKLTW TQLLDEVDEA LALGHKVKPV LLGPVTYLWL GKVKGEQFDR
LSLLQDILPV YQQVLAELAK RGIEWVQIDE PALVLELPQA WLAAFKPAYD ALQGQVKLLL
TTYFDSVSQN LETIKVLPVQ GLHVDLVHGK DDAATLSTQL PANWVLSLGA INGRNVWRAD
LSSWFERLQP LVGTRDLWLG SSCSLLHSPI DLSVEVRLDD EVKSWFAFAI QKCAELSLLS
QALNSGNGQA LEAYSAPIRA RRTSTRVNNA AVAQRLAAIT AQDSQRQNVY SVRAEAQRER
FNLPAWPTTT IGSFPQTTEI RGLRLDFKQG RLDSNNYRTG IAEHIKQAVI EQERLGLDVL
VHGEAERNDM VEYFGEHLDG FIFTQNGWVQ SYGSRCVKPP VIIGDVSRPE AITVEWAKYA
QSLTDKPMKG MLTGPVTILC WSFPREDVTR ETIAKQIALA LRDEVADLEA AGIGIIQIDE
PALREGLPLH RSDWDAYLAW AVDAFRLNAA VAKDDTQIHT HMCYCEFNDI MDSIAALDAD
VITIETSRSD MELLESFEEF EYPNEIGPGV YDIHSPNVPS VEWMEALLKK AAQRIPAERL
WVNPDCGLKT RGWPETRQAL ANMVQAAQRL REFSNV
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