Gene PC1_4066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4066 
Symbol 
ID8135064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4599648 
End bp4600430 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content53% 
IMG OID644867384 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_003019617 
Protein GI253690427 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAC CAACGTTGCT TCATCCCTCT TTATTACCGC TGGACGGCGG AATCAACTTC 
CGTGATTTAG GCGGTAACCG TGCTGCTGAT GGGCGGCTTA TCCGACACGG TAAACTTTTT
CGCTCCGGCT CGCTGGATCT GCTGAGTCAG GCTGACTGTG AACATCTTGC GGGTGTGCCT
ATTTCCCATG TGGTGGACTA TCGGGATGCC GATGAAATTG CGCAGAAGCC CGATGTCTTG
TGGACGGGCG CTCATTATCA CGCCTATCCG GCCAATCCAT TGCGTCACGA AGTGACGGCC
AATCTGGACT CGCTGGGATC TGATGTGCTG GCGGCGTTTG ATTCCCGGGC GTTTATGTTG
GAGCTTTATC GCCGTTTGCC TTTCAATAAT TCGGCCTATA AACAGCTGGT GTCGCTGCTA
TTACGGCCAG ATGAGGGCGG GTTGGTACAG CATTGCGCCG TGGGTAAAGA TCGCACGGGT
ATTGGTTCAG CATTAGTGAT GTTTGCGCTG GGTGCGGATG AACAGACGGT AATGGAAGAT
TACCTGCTGA CGGAAACAAC CCTGACGCCA TTTCGCCAGC AACTGTTGAC GCATTTGTCG
GCAACGCTTA ATGAGAAAGC GCTGGGACAG TTCTCTTATG TGCTGTCGGT GCAGGAAGAG
TTCATCGTGA CGGCGTTGCA GGCTATCTAC GAACGACACG GTTCGATCGA TAGCTGGCTT
GAGGTGGAAT ACGGTCTGGA TAATCGTGCA CGGAACTATT TGCAGGATAA ATATCTGGCG
TAA
 
Protein sequence
MTEPTLLHPS LLPLDGGINF RDLGGNRAAD GRLIRHGKLF RSGSLDLLSQ ADCEHLAGVP 
ISHVVDYRDA DEIAQKPDVL WTGAHYHAYP ANPLRHEVTA NLDSLGSDVL AAFDSRAFML
ELYRRLPFNN SAYKQLVSLL LRPDEGGLVQ HCAVGKDRTG IGSALVMFAL GADEQTVMED
YLLTETTLTP FRQQLLTHLS ATLNEKALGQ FSYVLSVQEE FIVTALQAIY ERHGSIDSWL
EVEYGLDNRA RNYLQDKYLA