| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4064 |
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| Symbol | |
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| ID | 8135062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4595169 |
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| End bp | 4596557 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867382 |
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| Product | phosphotransferase system EIIC |
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| Protein accession | YP_003019615 |
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| Protein GI | 253690425 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAAAA ATGACGTTAT TCAGTCAATC ATTAAACTGG TTGGCGGAAA CGAAAACATT
AATAAAGCCT GGCACTGTAT GACGCGGCTT CGGTTTGATT TAATTGATGA AAGTAAAGTG
CAAACTGAGG CCATCAAGAA TCTGCCAGGA ATATTAGGTG CTCAACACCA AAGTGAGCAA
TTTCAGATTA TTATCGGGCC ACAGGTCAAC GAGTATTACG AACTGCTGAG CGCACAGCTT
TCCCCGACGG CACTTTCCTC CGACGCACCA GCGCAGCCAG ACGCGCAGAA GTCGAAAAAG
GGGCTGGTTT CGCTATTCAT GGATACGGTT TCCGGCGTAT TCGGCCCGAT CGTTCCCGCC
ATCGCTGGCG CAGGGATGAT CAAAGGGCTG CTGGCTGGAT TGATCGCCAT GAAAGTGATC
TCCGCGAAAA CCGATACGGT GATCGTCCTC GATCTGATCG CCAGCGGTGT GTTCTATTTC
CTGCCGTTCT TCCTTGCGGT CTCGGCCGCC AAGATATTTA AAACGAACGA ATATCTGGCG
GCGGCCGTTG CAGCCTGCCT GATGTATCCA TCCTTGATGG AAGCAGCGAA GGCCTTAGCC
AGCCACAGCC CCGATGCGGT CAGCGCGTTT TACTTCATGG GCATATTGCC TATTTCGGTG
TTCAACTACT CTGCCAGTGT CATCCCGGTC ATTTTCTCCG TGCTGGCATT GAGCTATATC
CACCGCTGGG TCGATCGCAT AATGCCTTCG GTGCTGAAAA CCGTGTTTAC CCCGACGCTG
ACGCTGTTTA TCACCGCGCT GGTGTCGCTC ACGGTGATCG GGCCATTCGG GATCTACCTC
GGTAAACTGC TGGCGCTGTT TATTCAGAGC CTGTTCGATG TGTCATCTAT TTTTGCCGGT
TTCGTGGTGG GTGCAATTCG GCCTGTCGCC ATCCTGACTG GTATGCATCA CGCCATGACG
CCTATTGCGC TGCAAAACTT CGCCGATCAG GGTTTTGATA TGCTGATGCC GATGATGTGT
ATGGCTAACA TGGCGATTGC GGGTTCCACG TTTGCCATCT ACTTCCACGC CAAAACCCGT
CAGGATAAAT CTGTCGTGCT GTCTGCTGGA GTGTCTGCGC TGCTCGGTAT TACGGAACCC
GCGCTCTTCG GCGTGTTGAC CAAGTACAAA AAAGCGTTTA TCGCCGCCAC CGTTGCCAGC
TCTATCGCGT CGGCCTTTAT CGCGTTCTTC GGTGTCCGGC TGTATGGCTA CATTCTCTCG
AGTATTTTCA GCCTGCCAGC CTACATCGGC CCGTACTTTA GCTACGCCGT TTCCGGCATG
GCCATCGCCA TCGTGCTTTC CTTCACGCTG ACCTACATCC TGGTTGTCAG AGCCTCCAAA
CAGTCGTAA
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| Protein sequence | MGKNDVIQSI IKLVGGNENI NKAWHCMTRL RFDLIDESKV QTEAIKNLPG ILGAQHQSEQ
FQIIIGPQVN EYYELLSAQL SPTALSSDAP AQPDAQKSKK GLVSLFMDTV SGVFGPIVPA
IAGAGMIKGL LAGLIAMKVI SAKTDTVIVL DLIASGVFYF LPFFLAVSAA KIFKTNEYLA
AAVAACLMYP SLMEAAKALA SHSPDAVSAF YFMGILPISV FNYSASVIPV IFSVLALSYI
HRWVDRIMPS VLKTVFTPTL TLFITALVSL TVIGPFGIYL GKLLALFIQS LFDVSSIFAG
FVVGAIRPVA ILTGMHHAMT PIALQNFADQ GFDMLMPMMC MANMAIAGST FAIYFHAKTR
QDKSVVLSAG VSALLGITEP ALFGVLTKYK KAFIAATVAS SIASAFIAFF GVRLYGYILS
SIFSLPAYIG PYFSYAVSGM AIAIVLSFTL TYILVVRASK QS
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