| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4052 |
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| Symbol | |
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| ID | 8135050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4582353 |
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| End bp | 4582946 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867370 |
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| Product | twin-arginine translocation protein, TatB subunit |
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| Protein accession | YP_003019603 |
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| Protein GI | 253690413 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1826] Sec-independent protein secretion pathway components |
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| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTCGATA TCGGTTTTGG TGAATTGCTA TTGGTGATGG TTCTTGGCCT GATTGTTCTC
GGGCCGGAGC GTTTGCCTGT GGCAGTCAAG ACGGTTGCAG GCTGGATCAG GACGCTGCGT
GCGCTGGCGT CTACCGTTCA GAATGAGCTG TCGCAGGAGC TGAAACTTCA GGAGTTTCAG
GAAAGCCTGA AAAAAGTCGA AAAAGCCAGT TTGCAGAATC TGTCGCCTGA GTTGAAAGCC
TCAATGGATG AACTCAAAGA GGCGGCGGAA GCGATGAAAC GTGGCTATAC CGAAACGTCG
TCGCCGCAAA AGTCGGATGG TCACCAAAAG TCAGACGATC ATAACGCGAC GGTGGAGCAG
CCTCGTAACA CCCCGCTAAA CGATCCTGAA GCGGCCTACG ATGGCGTGAT TGAAGTAGAA
ACCGCAGTAC GTCCGGCAGA CGGCCAGCCT AAACCTGAAA ATGGTGCTGC TGCTGAACAT
CACCATGATA GCGACAGCGC GGCACGTGCT GAAGCTGTCG GCAACGATAA TGTCAAACCT
GAGCAGTCCC AGTCTTCTAC TGTTTCTGCC CGTCAACCGA GCGATAGTCG TTAG
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| Protein sequence | MFDIGFGELL LVMVLGLIVL GPERLPVAVK TVAGWIRTLR ALASTVQNEL SQELKLQEFQ
ESLKKVEKAS LQNLSPELKA SMDELKEAAE AMKRGYTETS SPQKSDGHQK SDDHNATVEQ
PRNTPLNDPE AAYDGVIEVE TAVRPADGQP KPENGAAAEH HHDSDSAARA EAVGNDNVKP
EQSQSSTVSA RQPSDSR
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