Gene PC1_4049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4049 
Symbol 
ID8135047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4579669 
End bp4580691 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content53% 
IMG OID644867367 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_003019600 
Protein GI253690410 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTG CTTTTCCCGG CACTTTCCCC GGCCGACGTA TGCGTCGCAT TCGTCGCCAT 
GATTTCAGCC GTCGCCTTGT TGCTGAGAAT CAACTGACGG TGAACGATTT GATTTATCCC 
GTTTTCGTAA TGGAAGGGAC AAATCATCGT CAGGAAGTGC CTTCAATGCC GGGGGTATAC 
CGGATGACTA TCGACGTGCT TCTGAAAGAA GCCGAAGAGA TCGCTAAGCT TGGCGTGCCG 
GTGCTGTCGC TGTTCCCCGT TATTGAAGCG GATAAGAAAT CGCTCTATGC CGAAGAAGCC 
TATAACTCGG ATGGCTTGGT TCCCCGCACG ATCCGCGCGC TGAAAGATGC CGTTCCTGAG 
TTGGGTTTGC TGACGGATGT GGCGCTCGAT CCCTACACGA CGCATGGGCA GGACGGGATT 
ATTGATGAAG ACGGTTATGT GGTTAACGAT GTCACCAAGG AGATTTTGGT GCGTCAGGCG 
CTGTCTCATG CTGAAGCCGG AGCCGAAATT ATTGCGCCCA GCGATATGAT GGATGGCCGT 
ATCGGTGCTA TCCGCGACAT GCTTGAAGCG CAGAACCTGA TCAATACCCA GATCATGGCG 
TACTCGGCTA AGTATGCATC GTGCTACTAC GGGCCTTTCC GCGACGCCGT GGGTTCAGCC 
AGCAATCTGA AAGGTGGCAA CAAGAAAACC TACCAGATGG ATCCCGCCAA CAGCGATGAA 
GCCCTGCAGG AAATTGCGCA GGATTTGCAG GAAGGTGCGG ATATGGTGAT GGTGAAACCG 
GGCATGCCTT ATCTGGATGT GGTGCGTCGC GTCAAGGATA CGTTCGGCGT ACCGACGTTT 
GCCTATCAGG TCTCTGGCGA ATATGCGATG CACATGGCGG CTATTCAAAA CGGCTGGTTA 
CAGGAACAAC CAGTGGTGAT GGAGTCTCTA CTGTGCTTTA AACGTGCGGG TGCAGATGGA 
GTGCTGACCT ATTTTGCCAA ACGTGTCGCT CAGTGGCTGC ACGATCAACA CATGCAACGC 
TAA
 
Protein sequence
MSTAFPGTFP GRRMRRIRRH DFSRRLVAEN QLTVNDLIYP VFVMEGTNHR QEVPSMPGVY 
RMTIDVLLKE AEEIAKLGVP VLSLFPVIEA DKKSLYAEEA YNSDGLVPRT IRALKDAVPE 
LGLLTDVALD PYTTHGQDGI IDEDGYVVND VTKEILVRQA LSHAEAGAEI IAPSDMMDGR 
IGAIRDMLEA QNLINTQIMA YSAKYASCYY GPFRDAVGSA SNLKGGNKKT YQMDPANSDE 
ALQEIAQDLQ EGADMVMVKP GMPYLDVVRR VKDTFGVPTF AYQVSGEYAM HMAAIQNGWL 
QEQPVVMESL LCFKRAGADG VLTYFAKRVA QWLHDQHMQR