Gene PC1_4045 details

Gene Information

• Locus tag: PC1_4045
• Symbol: fadA
• ID: 8135043
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4575417
• End bp: 4576580
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644867363
• Product: 3-ketoacyl-CoA thiolase
• Protein accession: YP_003019596
• Protein GI: 253690406
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02445] fatty oxidation complex, beta subunit FadA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.690184
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGG TAGTGATTGT TGATGCCGTT CGTACGCCGA TGGGACGCTC CAAAGGCGGT 
GCCTTCCGTC AGGTAAGAGC CGAAGACCTG TCCGCACACC TGATGCGCAG CCTATTAAGC 
CGTAACGCGG CACTGGACGC CCGTGAGATC GACGATATCT ATTGGGGATG TGTGCAACAG 
ACGCTGGAGC AAGGGTTCAA CGTGGCTCGC AATGCTGCCT TGCTGGCAGA AATCCCGATG 
AATGTCCCCG CGACTACGGT TAACCGGCTG TGCGGTTCCT CCATGCAGGC GCTCCACGAT 
GCTGCCCGCA CCATTATGGT TGGCGACGCG GACGTTTGCT TAATCGGTGG CGTTGAGCAT 
ATGGGACATG TGCCGATGAA TCATGGCGTC GATTTTCATC CGGGACTGAG CCGCACCATA 
GCTAAAGCGG CAGGTATGAT GGGGCTCACG GCCGAGATGC TGGGGCGTAT GCACAATATT 
AGCCGTGAGA TGCAGGATCA GTTCGCCGCT CGCTCACACC AACGGGCCCA TCACGCCACC 
CAGTCAGGGG CGTTTCGCCA TGAAATCATC CCTACGGCAG GGCATGATGC AGACGGCGCA 
CTGCAACGCT TCGATTATGA TGAAGTCATT CGCCCAGACA CCACCGTCGA TAGCCTTGCG 
GCGCTCAAAC CGGCGTTCGA TCCGGTTAAC GGCACAGTGA CGGCCGGATC ATCCTCGGCG 
CTGTCCGATG GCGCAGCAGC CATGTTGATC ATGAGCGAAT CCCGCGCGGC ATCATTAGGT 
TTACCCGTAC GGGCTCGCAT CCGGGCGATG GCCGTAGTTG GCTGCGATCC TTCGATTATG 
GGCTACGGCC CGGTTCCGGC GACAAAACTG GCGCTGAAGC GGGCAGGATT GAGCCTGTCC 
GATATCGGCC TCTTTGAGCT TAATGAGGCC TTCGCCGCCC AGACGCTACC CTGCATTAAA 
GATCTGGGTT TGCTGGAACA GATCGATGAA AAGGTCAATC TCAACGGTGG TGCGATTGCG 
CTAGGTCACC CGCTCGGTTG CTCAGGCGCA CGCATCTCTA CCACATTGAT TAATTTGATG 
GAAAGCCGCG ATGTTCAGTT TGGCGTGGCG ACAATGTGCA TCGGGCTGGG ACAGGGTATT 
GCAACGGTGT TTGAGCGCGT CTGA 

 

Protein sequence

MEKVVIVDAV RTPMGRSKGG AFRQVRAEDL SAHLMRSLLS RNAALDAREI DDIYWGCVQQ 
TLEQGFNVAR NAALLAEIPM NVPATTVNRL CGSSMQALHD AARTIMVGDA DVCLIGGVEH 
MGHVPMNHGV DFHPGLSRTI AKAAGMMGLT AEMLGRMHNI SREMQDQFAA RSHQRAHHAT 
QSGAFRHEII PTAGHDADGA LQRFDYDEVI RPDTTVDSLA ALKPAFDPVN GTVTAGSSSA 
LSDGAAAMLI MSESRAASLG LPVRARIRAM AVVGCDPSIM GYGPVPATKL ALKRAGLSLS 
DIGLFELNEA FAAQTLPCIK DLGLLEQIDE KVNLNGGAIA LGHPLGCSGA RISTTLINLM 
ESRDVQFGVA TMCIGLGQGI ATVFERV