Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4040 |
Symbol | hemG |
ID | 8135038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4569032 |
End bp | 4569571 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644867358 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_003019591 |
Protein GI | 253690401 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG4635] Flavodoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00450028 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTT TGATCGTGTT TTCGAGTCGG GATGGGCAAA CAAGAGCCAT TGCCTCCTCT ATTGCAAATA CGCTGAAAGG AACCCTGGAG TGTGATGTTG TTAACGTACT CAATGCGAAT GATATCGATC TTGGTCAATA CGATCGGGTG ATGATTGGGG CATCGATTCG ATATGGGCGC TTTCATCCTG CGGTAAATCA ATTTATCCAT AAACACCTGA CTTCTCTGCA ACAGTTGCCC AGCGCATTCT TCTCCGTGAA CCTCACTGCT CGTAAGCCAG AAAAGCGCAC AATACAAACC AATGCTTATA CACGTAAATT CCTGCTGAGC TCTCCGTGGC AACCGGATTT GTGTTGTGTG TTTGCGGGTG CCCTGCGCTA TCCCCGTTAC CGCTGGTTTG ATCGGGTAAT GATTCAGCTG ATTATGCGTA TGACGGGGGG GGAAACGGAT AGCACGAAAG AGATTGAATA TACGGACTGG CAGCAGGTTG CCCGTTTCGC ACAGGATTTT GCCCAATTAG CGGCGAAAAA TCCGGCATAA
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Protein sequence | MKALIVFSSR DGQTRAIASS IANTLKGTLE CDVVNVLNAN DIDLGQYDRV MIGASIRYGR FHPAVNQFIH KHLTSLQQLP SAFFSVNLTA RKPEKRTIQT NAYTRKFLLS SPWQPDLCCV FAGALRYPRY RWFDRVMIQL IMRMTGGETD STKEIEYTDW QQVARFAQDF AQLAAKNPA
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