Gene PC1_4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4040 
SymbolhemG 
ID8135038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4569032 
End bp4569571 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content48% 
IMG OID644867358 
Productprotoporphyrinogen oxidase 
Protein accessionYP_003019591 
Protein GI253690401 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG4635] Flavodoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00450028 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTT TGATCGTGTT TTCGAGTCGG GATGGGCAAA CAAGAGCCAT TGCCTCCTCT 
ATTGCAAATA CGCTGAAAGG AACCCTGGAG TGTGATGTTG TTAACGTACT CAATGCGAAT
GATATCGATC TTGGTCAATA CGATCGGGTG ATGATTGGGG CATCGATTCG ATATGGGCGC
TTTCATCCTG CGGTAAATCA ATTTATCCAT AAACACCTGA CTTCTCTGCA ACAGTTGCCC
AGCGCATTCT TCTCCGTGAA CCTCACTGCT CGTAAGCCAG AAAAGCGCAC AATACAAACC
AATGCTTATA CACGTAAATT CCTGCTGAGC TCTCCGTGGC AACCGGATTT GTGTTGTGTG
TTTGCGGGTG CCCTGCGCTA TCCCCGTTAC CGCTGGTTTG ATCGGGTAAT GATTCAGCTG
ATTATGCGTA TGACGGGGGG GGAAACGGAT AGCACGAAAG AGATTGAATA TACGGACTGG
CAGCAGGTTG CCCGTTTCGC ACAGGATTTT GCCCAATTAG CGGCGAAAAA TCCGGCATAA
 
Protein sequence
MKALIVFSSR DGQTRAIASS IANTLKGTLE CDVVNVLNAN DIDLGQYDRV MIGASIRYGR 
FHPAVNQFIH KHLTSLQQLP SAFFSVNLTA RKPEKRTIQT NAYTRKFLLS SPWQPDLCCV
FAGALRYPRY RWFDRVMIQL IMRMTGGETD STKEIEYTDW QQVARFAQDF AQLAAKNPA