| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4039 |
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| Symbol | |
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| ID | 8135030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4561853 |
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| End bp | 4562809 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644867350 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003019590 |
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| Protein GI | 253690400 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAGAC GTTTACTGGT AGCTGTTGCT GTAAGCTCGG CGTTATGTGG TGCCGTACAG
GCAAAACCCT TAACTGTTGG GTTTTCCCAG ATTGGTTCAG AATCAGGATG GCGCTCTGCA
GAAACTAAAG TGTCAAAGCA GGAAGCCGAG AAGCGTGGAA TAACGTTAAA AATAGCTGAT
GCTCAACAGA AGCAGGAGAA CCAGATTAAG GCCGTGCGGT CCTTTATCGC TCAGGGGGTT
GATGCCATCT TTATTGCGCC GGTCGTCGCC ACAGGATGGG CGCCAGTGTT ACAGGAAGCT
AAGGAAGCAA AAATACCGGT GTTCCTGCTC GATCGAACGA TTGAGGTAAG CGATCCATCG
CTGTACACCG CTGCTATCGC CTCTGACAGC GTCTATGAAG GAAAAGTGGC AGGGGAATGG
CTTGTGAAGG AGGCTGCAGG CAAACCTTGT AATGTTGTTG AACTACAGGG AACTGTTGGG
GCGAGTGTCG CGATAAATCG CAAGAAAGGG TTTGCTGAGG GGATAGCTTC AGATCCGCAG
ATAAAAATTA TTCGTTCACA ATCGGGAGAC TTTACCCGCA GTAAGGGTAA AGAAGTCATG
GAAAGCTTTA TTAAAGCTGA GCAGAACGGA AAAAATATCT GTGCGGTTTA TGCACATAAT
GATGACATGG CTATAGGCGC TATTCAGGCA ATTAAAGAAG CGGGTTTGAA ACCTGGTTCA
CAGATAAAAG TTGTCTCCAT TGACGGTGTC CCTGACATTT TCAAAGCTAT GATGAATGGC
GAAGCTAATG CTACCGTTGA ATTAACGCCT AATATGGCTG GGCCTGCTTT TGATGCTTTA
TTAGCGATGA AGAAGGATGG CAAACAGCCT GAAAAATTCA TTCAAACTGA ATCACGTTTA
TTACTGCCTG ATACGGCAAA ACAGGAATAT GAAACTAAGA AGGATCTCGG TTATTGA
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| Protein sequence | MYRRLLVAVA VSSALCGAVQ AKPLTVGFSQ IGSESGWRSA ETKVSKQEAE KRGITLKIAD
AQQKQENQIK AVRSFIAQGV DAIFIAPVVA TGWAPVLQEA KEAKIPVFLL DRTIEVSDPS
LYTAAIASDS VYEGKVAGEW LVKEAAGKPC NVVELQGTVG ASVAINRKKG FAEGIASDPQ
IKIIRSQSGD FTRSKGKEVM ESFIKAEQNG KNICAVYAHN DDMAIGAIQA IKEAGLKPGS
QIKVVSIDGV PDIFKAMMNG EANATVELTP NMAGPAFDAL LAMKKDGKQP EKFIQTESRL
LLPDTAKQEY ETKKDLGY
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