| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4036 |
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| Symbol | |
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| ID | 8135027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4558183 |
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| End bp | 4559145 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644867347 |
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| Product | inner membrane ABC transporter permease protein YjfF |
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| Protein accession | YP_003019587 |
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| Protein GI | 253690397 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGAAAC GCCACTTCCC CCTGTTGATG ACGATTCTGG TATTTATTGC AGGTTATTTA
TTCTGTCTCA GCCAGTTTCC TGGCTTTGCT TCGACGCGAG TTTTCTTTGA TTTACTGACG
GATAATGCTT TTTTGGGGAT CGTGGCGGTT GGGATGACGT TTGTCATCCT CTCTGGCGGG
ATCGATCTTT CCGTAGGGTC AGTTATTGCC TTTACCGGCG TGTTATTGGC CAAACTGATT
GGTACATATG GCATCGATCC TTTCTTTGCA TTCACAATCG CACTGGTGAT GGGAGCTATG
TTTGGCGGGG TGATGGGGTG GATTATTGAT ACGCTCAAGT TGCCTGCATT CATTATCACC
CTAGCGGGGA TGTTCTTTGT TCGTGGCATG AGCTTCATCG TCTCTCAGGA GTCGATACCC
ATCGATCATC CGGTCTATAG CCAACTGGCA GGTTTAGCAT GGCGCATGCC TGATGGGGGA
CGTTTTACCT TTCTGGCGCT GATTATGCTG GTTGTTGTGC TGCTGGGGAT TGTGATGGCG
CATCGTACCC GTTTCGGTAA CCGTGTTTAT GCGATTGGCG GTAATAGCTA TTCTGCGGAG
CTGATGGGCG TGCCCGTCAG ACGGACGACG ATTCAGATAT ACATGCTTTC CAGTACATTA
GCGGTACTGT CAGGCATTGT TTTTTCGCTC TATACCTCGG CGGGCTATGC TCTGGCGGCA
AGCGGTGTGG AATTGGACGC CATCGCGGCC GTCGTAATCG GCGGTACGCT CCTGACCGGC
GGTGTTGGCA CCGTATTGGG AACGCTGTTT GGCGTACTGA TTCAGGGGCT GATTCAAACG
TATATCACAT TTGATGGCAC CTTAAGTTCA TGGTGGACAA AAATCGTCAT CGGCTTCCTG
CTGTTTGCTT TCATTGGGTT ACAGAAAGCG TTAAGCACCT TCTGGTTAGC CAGACGTGCT
TAA
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| Protein sequence | MLKRHFPLLM TILVFIAGYL FCLSQFPGFA STRVFFDLLT DNAFLGIVAV GMTFVILSGG
IDLSVGSVIA FTGVLLAKLI GTYGIDPFFA FTIALVMGAM FGGVMGWIID TLKLPAFIIT
LAGMFFVRGM SFIVSQESIP IDHPVYSQLA GLAWRMPDGG RFTFLALIML VVVLLGIVMA
HRTRFGNRVY AIGGNSYSAE LMGVPVRRTT IQIYMLSSTL AVLSGIVFSL YTSAGYALAA
SGVELDAIAA VVIGGTLLTG GVGTVLGTLF GVLIQGLIQT YITFDGTLSS WWTKIVIGFL
LFAFIGLQKA LSTFWLARRA
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