Gene PC1_4030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4030 
Symbol 
ID8135021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4551728 
End bp4552654 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content54% 
IMG OID644867341 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_003019581 
Protein GI253690391 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.597878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA AAGCGGATTA CATTTGGTTC AATGGCGAAA TGGTTCCATG GGCTGAAGCA 
AAAGTACACG TGATGTCGCA CGCTTTGCAT TATGGTACCT CCGTGTTTGA GGGCGTTCGT 
TGCTACAATT CACACAAAGG TCCGGTGGTT TTTCGTCACC GCGAGCACAT GCAGCGCCTG 
CGTGATTCGG CAAAAATTTA CCGTATGCCA GTCGCGCAGA GTGTGGATGA ACTGATGGAA 
GCCTGTCGTG AAACGCTGCG TAAAAATAAT CTGACCAGTG CGTATATCCG CCCGTTGGTG 
TTCATTGGCG ATGTGGGGAT GGGGGTTAAC CCACCAGACG GTTACCAAAC TGATGTGATT 
ATCGCGGCCT TTCCGTGGGG CGCGTACCTG GGTGAAGAAG CGCTGGAAGC GGGCATTGAT 
GCGATGGTGT CGTCCTGGAA TCGCGTTGCG GCGAATACCA TTCCAACCGC CGCTAAAGCG 
GGTGGCAATT ATCTATCCTC CCTGCTGGTG GGCAGCGAAG CACGTCGCCA CGGCTATCAG 
GAAGGGATTG CACTGGATGT CCACGGCTAT GTTTCTGAAG GCGCGGGCGA GAACCTGTTT 
GAAGTGAAGG ACGGTATTAT CTTCACACCG CCGTTTACCT CTTCGGCGCT GCCGGGCATT 
ACGCGTGATG CCATCATCAA GCTGGCGAAG GACGCGGGAT ATGAAGTGCG TGAGCAGGTG 
CTGTCCCGCG AGTCACTGTA TCTGGCGGAT GAAGTGTTTA TGTCCGGCAC GGCGGCGGAA 
ATTACCCCAG TGCGTAGCGT AGACGGTATT CAGGTCGGCA TCGGCAAACG CGGCCCGGTC 
ACCAAAGCCT TGCAGGAGGC GTTCTTTGGC CTCTTCACGG GTGAAACCGA AGATAAATGG 
GGCTGGTTGG ATCCGATAAA TCAGTAA
 
Protein sequence
MTKKADYIWF NGEMVPWAEA KVHVMSHALH YGTSVFEGVR CYNSHKGPVV FRHREHMQRL 
RDSAKIYRMP VAQSVDELME ACRETLRKNN LTSAYIRPLV FIGDVGMGVN PPDGYQTDVI 
IAAFPWGAYL GEEALEAGID AMVSSWNRVA ANTIPTAAKA GGNYLSSLLV GSEARRHGYQ 
EGIALDVHGY VSEGAGENLF EVKDGIIFTP PFTSSALPGI TRDAIIKLAK DAGYEVREQV 
LSRESLYLAD EVFMSGTAAE ITPVRSVDGI QVGIGKRGPV TKALQEAFFG LFTGETEDKW 
GWLDPINQ