| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4028 |
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| Symbol | |
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| ID | 8135019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4548254 |
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| End bp | 4549798 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644867339 |
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| Product | threonine dehydratase |
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| Protein accession | YP_003019579 |
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| Protein GI | 253690389 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.749661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTGT CACAACCTCT TCCTGCCGCG CCGGGAGGCG CGGAGTACCT GCGGGCGATC
TTGCGCTCGC CCGTGTATGA AGTCACGCAG GTCACACCGC TGGAGAAGAT GGAGAAGATC
TCTTCGCGGC TGGGTAATGT CATTCTGGTA AAACGTGAAG ATCGGCACGC GGTGCACAGC
TTCAAGCTGC GCGGCGCGTA CGCGATGATG GCGGGGCTGA GCGACGAGCA AAAGTCACAC
GGCGTGGTGA CGGCATCGGC GGGTAACCAT GCGCAGGGCG TGGCGCTCTC CTCCACCAAG
CTGGGCATTA AATCGCTGAT TGTGATGCCA GTGGCGACGG CCGATATCAA AGTGGATGCG
GTACGTGGTT TTGGCGGCGA AGTGCTGCTA TACGGCGCGA ACTTTGATGA AGCCAAGGCA
AAGGCCATTG AACTGTCGCA GCAGCAGAAA ATGACGTTTC TACCGCCGTT CGATCACCCG
GCAGTGATTG CGGGTCAAGG CACGCTGGCG CTGGAACTGC TACAGCAGGA TGCCCATCTG
GATCGCGTGT TTGTTCCCGT CGGCGGCGGC GGTCTGGCGG CGGGTGTTGC CGTCCTGATC
AAACAACTGA TGCCGCAGAT TAAGGTGATC GGCGTGGAAG CGGAAGATTC CGCCTGTCTG
CGTGCGGCGC TGGATGCCGG GCAACCGGTC GATCTGCCGC GTGTCGGGCT GTTTGCCGAA
GGCGTCGCAG TGAAACGCAT CGGCGATGAA ACGTTCCGCT TATGTCGGGA ATATCTGGAT
GATGTGATTA CCGTCGACAG TGATGCCATC TGTGCGGCAG TGAAAGATCT GTTCGAAGAT
GTGCGTGCGA TTGCTGAACC GTCCGGCGCG CTGGCGTTAG CGGGGATGAA AAAATACATC
CAGCAGCACC AGATTCAGGG TGAGCGCCTG GCGCATATCC TGTCCGGTGC GAACGTTAAC
TTCCACGGGT TACGCTACGT TTCCGAACGC TGCGAGCTGG GTGAACAGCG TGAAGCCTTG
CTGGCCGTGA CGATCCCCGA GCAACAGGGC AGCTTCCTGA AATTTTGTCA ACTACTGGGC
GGTCGTTCCG TTACCGAGTT CAACTATCGC TATGCGGATG CCAAAGATGC CTGCATTTTT
GTTGGCGTGC GCCTGACGCG TGGCTATGCG GAGCGGCAGG AGATTATCGC TGAGCTTTCT
GCAGACGGTT ATGAAGTGGT GGATTTGTCC GATGATGAAA TGGCGAAGCT GCACGTTCGC
TACATGGTCG GCGGACGCCC CTCCAAACCG CTACAGGAAC GGCTTTATAG TTTTGAGTTC
CCTGAATCGC CGGGGGCGTT ACTGAAATTC CTGCATACGC TGGGGACGCA CTGGAATATT
TCGCTGTTCC ATTACCGCAG CCACGGCACA GATTTTGGCC GTGTGCTGGC CGCGTTTGAA
CTGCAAGCGG GCGATCGGGA ATTCGAGCAG CATCTACAGG CGCTGGGCTA TGAATGCCAC
GACGAAACCA ATAATCCGGC GTTCCGCTTC TTTTTAGCGG GTTAA
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| Protein sequence | MAVSQPLPAA PGGAEYLRAI LRSPVYEVTQ VTPLEKMEKI SSRLGNVILV KREDRHAVHS
FKLRGAYAMM AGLSDEQKSH GVVTASAGNH AQGVALSSTK LGIKSLIVMP VATADIKVDA
VRGFGGEVLL YGANFDEAKA KAIELSQQQK MTFLPPFDHP AVIAGQGTLA LELLQQDAHL
DRVFVPVGGG GLAAGVAVLI KQLMPQIKVI GVEAEDSACL RAALDAGQPV DLPRVGLFAE
GVAVKRIGDE TFRLCREYLD DVITVDSDAI CAAVKDLFED VRAIAEPSGA LALAGMKKYI
QQHQIQGERL AHILSGANVN FHGLRYVSER CELGEQREAL LAVTIPEQQG SFLKFCQLLG
GRSVTEFNYR YADAKDACIF VGVRLTRGYA ERQEIIAELS ADGYEVVDLS DDEMAKLHVR
YMVGGRPSKP LQERLYSFEF PESPGALLKF LHTLGTHWNI SLFHYRSHGT DFGRVLAAFE
LQAGDREFEQ HLQALGYECH DETNNPAFRF FLAG
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