| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4015 |
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| Symbol | |
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| ID | 8135006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4531868 |
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| End bp | 4533895 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867326 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_003019566 |
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| Protein GI | 253690376 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTAA ACCCCAGCCA ACAGCACGCC GTCGAATTCG TCACCGGACC TTGTCTGGTA
CTGGCGGGTG CAGGTTCAGG CAAGACCCGC GTGATCACCA ATAAAATTGC GCACCTTATC
CGCCAGTGTG GCTATCAGGC GCGGCATATT GCTGCCGTGA CTTTTACCAA TAAAGCGGCG
CGTGAGATGA AGGAGCGCGT GGCGCAAACG CTGGGGCGCA AAGAAACACG CGGGCTGATG
ATTGCGACTT TCCATACGCT GGGGTTGGAG ATCATCAAGC GTGAATACGC CGCATTGGGG
ATGAAATCCA ATTTCTCCCT GTTCGACGAT CAGGATCAGA TGGCGCTGCT GAAAGAGCTG
ACGGAGCAGT GGCTGGAAAA TGATAAGGTT CTGCTGCAAC AGCTGATCTC GACGATCTCA
AACTGGAAAA ACGATCTGAT CGATCCTGCC GGTGCGGCAG CGACGGCGCG TTCTGAACGC
GACAAGCTGT TTGTGCATTG CTATTCGCTC TATCACGAAC ATCTGCGTGC CTGTAACGTA
CTGGACTTCG ACGATCTGAT TTTGCTGCCT ACGCTACTGC TGAAGCAGAA TGCTGAGGTA
CGCGAACGCT GGCAGAACCG CTTACGCTAC CTGCTGGTGG ATGAATATCA GGACACCAAC
ACCAGCCAGT ATGAGCTGGT TAAGCTGCTG GTCGGCACCC GTGCGCGTTT CACTGTCGTT
GGCGATGACG ATCAGTCTAT TTACTCCTGG CGCGGGGCGC GTCCACAGAA TCTGGTGCTG
CTGCAGCAGG ATTTCCCAAC GCTTGACGTG ATCAAACTGG AACAAAACTA CCGCTCGTCC
GGGCGTATTC TGAAAGCGGC CAATATTCTC ATCGCCAATA ACCCGCACGT CTTTGAAAAA
CGGTTGTTCT CGGAACTGGG TTACGGTGAT GAGCTTAAAG TGATTACCGC CAACAACGAA
GATCATGAGG CGGAACGGGT CGTTGGTGAG CTAATCGCCC ATCACTTTAT TAAAAAGACC
CAGTATGGCG ACTATGCAAT TCTGTATCGT GGTAACCACC AGTCGCGCCT GTTTGAAAAG
ATGCTGATGC AGAACCGTAT TCCGTATCGC ATTTCCGGCG GCACGTCCTT TTTCTCCCGT
CCTGAAATTA AAGACTTGCT GGCTTATCTG CGCGTTCTGA CCAATCCGGA TGATGACAGC
GCGTTCTTAC GTATCGTGAA TACGCCCAAA CGTGAAATTG GCCCGGCGAC GATGAAGAAG
CTGGGTGAGT GGGCGGGGCA ACGCAATAAA GGCCTGTTTA GCGCGAGTTT TGATCTGGGG
CTGAGCCAGT CGCTGACCGG CCGTGGGCTG GAATCCCTGC AACGGTTTAC GCAGTGGATG
GCGGAAATCG CCCGTTTGGC AGAGCATGAA CCGGTAGCCG CCGTGCGCGA CCTGATTCAT
GGATTGGACT ACGAAAGCTG GCTGTATGAA ACCTCACCTA GCCCGAAAGC GGCGGAAATG
CGGATGAAGA ACGTCAATCA GCTATTCAGC TGGATGACGG AAATGCTGGA AGGGTCTGAA
CTGGATGAGC CGATGACGCT GACGCAGGTG GTGACGCGCT TCACGTTGCG GGACATGATG
GAGCGTGGTG AAAGTGAAGA GGAGCTGGAT CAGGTACAGC TGATGACACT GCATGCGTCC
AAAGGTCTGG AGTTTCCGTA CGTCTTTTTG GTCGGAATGG AAGAGGGACT ACTGCCGCAC
CAAAGCAGTA TTGATGAGGA CAACGTTGAT GAAGAGCGTC GTCTGGCGTA TGTGGGGATT
ACGCGTGCAC AGCGTGAACT CATCTTCACG CTTTGCAAAG AGCGCCGCCA GTATGGTGAA
TTAGTTCGCC CTGAGCCGAG CCGTTTCCTG CTGGAATTGC CACAGGATGA TGTGGTGTGG
GAAACGGAAC GGAAAGTGGT TAGCGCACAA GAGCGGATGC AGAAAGGTCA GGCGAACGTT
GCTAACATCC GGGCGATGTT AGCAAAGGCA AAAGGGGAAG GAGAGTAA
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| Protein sequence | MRLNPSQQHA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI RQCGYQARHI AAVTFTNKAA
REMKERVAQT LGRKETRGLM IATFHTLGLE IIKREYAALG MKSNFSLFDD QDQMALLKEL
TEQWLENDKV LLQQLISTIS NWKNDLIDPA GAAATARSER DKLFVHCYSL YHEHLRACNV
LDFDDLILLP TLLLKQNAEV RERWQNRLRY LLVDEYQDTN TSQYELVKLL VGTRARFTVV
GDDDQSIYSW RGARPQNLVL LQQDFPTLDV IKLEQNYRSS GRILKAANIL IANNPHVFEK
RLFSELGYGD ELKVITANNE DHEAERVVGE LIAHHFIKKT QYGDYAILYR GNHQSRLFEK
MLMQNRIPYR ISGGTSFFSR PEIKDLLAYL RVLTNPDDDS AFLRIVNTPK REIGPATMKK
LGEWAGQRNK GLFSASFDLG LSQSLTGRGL ESLQRFTQWM AEIARLAEHE PVAAVRDLIH
GLDYESWLYE TSPSPKAAEM RMKNVNQLFS WMTEMLEGSE LDEPMTLTQV VTRFTLRDMM
ERGESEEELD QVQLMTLHAS KGLEFPYVFL VGMEEGLLPH QSSIDEDNVD EERRLAYVGI
TRAQRELIFT LCKERRQYGE LVRPEPSRFL LELPQDDVVW ETERKVVSAQ ERMQKGQANV
ANIRAMLAKA KGEGE
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