| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4013 |
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| Symbol | |
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| ID | 8135004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4529061 |
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| End bp | 4530353 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867324 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_003019564 |
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| Protein GI | 253690374 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA CACACTTAAC TGAACAGAAG TTTTCCGACT TCGCCCTGCA CCCGCAGGTT
ATTGAAGCTC TTGAAAGCAA AGGGTTTCAT AACTGTACGC CTATTCAGGC GTTAGCTCTG
CCATTGGCTC TGTCAGGGCG TGATGTTGCA GGTCAGGCGC AAACCGGTAC CGGCAAGACG
CTGGCTTTTC TCGCGTCTAC TTTCCATTAT TTGCTTTCAC ACCCTGCAAA CGCAGAGCGT
CAAACCAATC AACCCCGTGC CTTAATTATG GCACCAACGC GTGAACTGGC CGTCCAGATT
CACTCTGACG CAGAAGCGCT GTCTCACCTT ACCGGGTTAA AACTGGGTTT AGCCTACGGT
GGAGACGGCT ACGACAAGCA GCTTAAGGTG CTGGAAAACG GCGTTGATAT TCTGATCGGC
ACCACCGGTC GCCTAATTGA TTACGCCAAA CAAAACCATA TCAATCTGGG CGCGATTCAG
GTCGTCGTGC TGGACGAAGC GGACCGTATG TACGATCTCG GCTTCATCAA AGATATTCGC
TGGTTGTTCC GCCGTATGCC GCCAGCAGCA CAGCGTCTGA ACATGCTCTT TTCCGCAACG
CTCTCCTACC GGGTGCGTGA GCTCGCGTTT GAACAGATGA ATAACGCAGA GTACGTGGAA
GTTGAACCGG AACAGAAAAC CGGCCATCGC ATTAAAGAAG AACTGTTTTA TCCATCCAAC
GAAGAAAAAA TGCGCCTGCT CCAGACACTG CTGGAAGAAG AGTGGCCGGA TCGCTGCATC
ATTTTCGCGA ATACCAAGCA TCGCTGCGAA GACATCTGGG GTCACCTGGC TGCTGACGGC
CATCGCGTTG GGCTGCTGAC GGGCGACGTC GCACAGAAAA AACGTCTGCG TATTCTGGAA
GAATTTACCC AAGGTAATCT GGATATTCTG GTCGCAACGG ACGTTGCAGC ACGCGGTTTA
CATATTCCTT CTGTGACCCA CGTTTTCAAC TACGACCTGC CGGATGACTG CGAAGACTAC
GTTCACCGTA TTGGCCGTAC TGGCCGTGCG GGACAAAGCG GATTTTCTAT CAGCCTGGCC
TGCGAAGAGT ACGCGCTGAA CCTCCCAGCT ATCGAGACCT ATATTGGTCA CAGCATCCCG
GTCAGCAAAT ACAACAGCGA TGCACTGATG AATGATTTAC CCGCGCCGAA GCGTTTAACG
CGCCCACCGC GCTCCAATAA TGGCCCGCGC CGACACAACA ATGCGCCGCG CCGCAGTGGA
GCGCCCCGTA ATAACCGTAA ACGAGCGGAT TAA
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| Protein sequence | MSKTHLTEQK FSDFALHPQV IEALESKGFH NCTPIQALAL PLALSGRDVA GQAQTGTGKT
LAFLASTFHY LLSHPANAER QTNQPRALIM APTRELAVQI HSDAEALSHL TGLKLGLAYG
GDGYDKQLKV LENGVDILIG TTGRLIDYAK QNHINLGAIQ VVVLDEADRM YDLGFIKDIR
WLFRRMPPAA QRLNMLFSAT LSYRVRELAF EQMNNAEYVE VEPEQKTGHR IKEELFYPSN
EEKMRLLQTL LEEEWPDRCI IFANTKHRCE DIWGHLAADG HRVGLLTGDV AQKKRLRILE
EFTQGNLDIL VATDVAARGL HIPSVTHVFN YDLPDDCEDY VHRIGRTGRA GQSGFSISLA
CEEYALNLPA IETYIGHSIP VSKYNSDALM NDLPAPKRLT RPPRSNNGPR RHNNAPRRSG
APRNNRKRAD
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