Gene PC1_4012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4012 
Symbol 
ID8135003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4528616 
End bp4528942 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content48% 
IMG OID644867323 
Productthioredoxin 
Protein accessionYP_003019563 
Protein GI253690373 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA AAATAATTCA CCTGACTGAT GACAGTTTCG GCACGAAAGT ACTGCAAGCT 
GAGGGCGCTA TCCTGGTTGA TTTCTGGGCT GAGTGGTGCG GTCCTTGCAA AATGATCGCT
CCTATTCTGG ATGAAATCGC CGAAGAGTTT GAAGGCAAAC TGACGGTTAC CAAACTGAAT
ATTGATGAAA ACCCGGCAAC TGCGCCGAAA TATGGTATCC GTGGCATTCC TACTCTGTTG
CTGTTTAAAA ACGGCGAAGT CGCTGCGACA AAAGTCGGCG CACTGTCCAA AGGGCAACTG
AAAGAGTTCC TGACGGCAAA TCTGTAA
 
Protein sequence
MSDKIIHLTD DSFGTKVLQA EGAILVDFWA EWCGPCKMIA PILDEIAEEF EGKLTVTKLN 
IDENPATAPK YGIRGIPTLL LFKNGEVAAT KVGALSKGQL KEFLTANL