Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4012 |
Symbol | |
ID | 8135003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4528616 |
End bp | 4528942 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644867323 |
Product | thioredoxin |
Protein accession | YP_003019563 |
Protein GI | 253690373 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATA AAATAATTCA CCTGACTGAT GACAGTTTCG GCACGAAAGT ACTGCAAGCT GAGGGCGCTA TCCTGGTTGA TTTCTGGGCT GAGTGGTGCG GTCCTTGCAA AATGATCGCT CCTATTCTGG ATGAAATCGC CGAAGAGTTT GAAGGCAAAC TGACGGTTAC CAAACTGAAT ATTGATGAAA ACCCGGCAAC TGCGCCGAAA TATGGTATCC GTGGCATTCC TACTCTGTTG CTGTTTAAAA ACGGCGAAGT CGCTGCGACA AAAGTCGGCG CACTGTCCAA AGGGCAACTG AAAGAGTTCC TGACGGCAAA TCTGTAA
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Protein sequence | MSDKIIHLTD DSFGTKVLQA EGAILVDFWA EWCGPCKMIA PILDEIAEEF EGKLTVTKLN IDENPATAPK YGIRGIPTLL LFKNGEVAAT KVGALSKGQL KEFLTANL
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